static char help[] = "Demonstrates use of VecCreateGhost().\n\n"; /*T Concepts: vectors^assembling vectors; Concepts: vectors^ghost padding; Processors: n Description: Ghost padding is one way to handle local calculations that involve values from other processors. VecCreateGhost() provides a way to create vectors with extra room at the end of the vector array to contain the needed ghost values from other processors, vector computations are otherwise unaffected. T*/ /* Include "petscvec.h" so that we can use vectors. Note that this file automatically includes: petsc.h - base PETSc routines petscis.h - index sets petscsys.h - system routines petscviewer.h - viewers */ #include "petscvec.h" #undef __FUNCT__ #define __FUNCT__ "main" int main(int argc,char **argv) { PetscMPIInt rank,size; PetscInt nlocal = 6,nghost = 2,ifrom[2],i,rstart,rend; PetscErrorCode ierr; PetscTruth flg; PetscScalar value,*array,*tarray=0; Vec lx,gx,gxs; PetscInitialize(&argc,&argv,(char *)0,help); ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRQ(ierr); if (size != 2) SETERRQ(1,"Must run example with two processors\n"); /* Construct a two dimensional graph connecting nlocal degrees of freedom per processor. From this we will generate the global indices of needed ghost values For simplicity we generate the entire graph on each processor: in real application the graph would stored in parallel, but this example is only to demonstrate the management of ghost padding with VecCreateGhost(). In this example we consider the vector as representing degrees of freedom in a one dimensional grid with periodic boundary conditions. ----Processor 1--------- ----Processor 2 -------- 0 1 2 3 4 5 6 7 8 9 10 11 |----| |-------------------------------------------------| */ if (!rank) { ifrom[0] = 11; ifrom[1] = 6; } else { ifrom[0] = 0; ifrom[1] = 5; } /* Create the vector with two slots for ghost points. Note that both the local vector (lx) and the global vector (gx) share the same array for storing vector values. */ ierr = PetscOptionsHasName(PETSC_NULL,"-allocate",&flg);CHKERRQ(ierr); if (flg) { ierr = PetscMalloc((nlocal+nghost)*sizeof(PetscScalar),&tarray);CHKERRQ(ierr); ierr = VecCreateGhostWithArray(PETSC_COMM_WORLD,nlocal,PETSC_DECIDE,nghost,ifrom,tarray,&gxs);CHKERRQ(ierr); } else { ierr = VecCreateGhost(PETSC_COMM_WORLD,nlocal,PETSC_DECIDE,nghost,ifrom,&gxs);CHKERRQ(ierr); } /* Test VecDuplicate() */ ierr = VecDuplicate(gxs,&gx);CHKERRQ(ierr); ierr = VecDestroy(gxs);CHKERRQ(ierr); /* Access the local representation */ ierr = VecGhostGetLocalForm(gx,&lx);CHKERRQ(ierr); /* Set the values from 0 to 12 into the "global" vector */ ierr = VecGetOwnershipRange(gx,&rstart,&rend);CHKERRQ(ierr); for (i=rstart; i