% Papers using MPI
%
% This is a partial list, begun in late October, 1997. It is intended to give
% an example of the range of applications that are known to be using
% MPI.
% Note that some author lists are incomplete; if you have a more
% complete reference, please send it to gropp mcs.anl.gov .



@Article{CooFinTseYor97:mpi-groups,
author = {G. Cooperman and L. Finkelstein and M. Tselman and B. York},
title = {Constructing permutation representations for matrix groups},
journal = {Journal of Symbolic Computation},
year = 1997,
volume = 24,
number = {3--4},
month = {Sept.-Oct.},
pages = {471--488},
}


@Article{AhuLon97:mpi-rk-scattering,
author = {V. Ahuja and L. N. Long},
title = {A parallel finite-volume {R}unge-{K}utta algorithm for electromagnetic scattering},
journal = {Journal of Computational Physics},
year = 1997,
volume = 137,
number = 2,
month = NOV,
pages = {299--320},
}

@Article{GorBi98,
author = "S. Gorlatch and H. Bischof",
title = "A Generic MPI Implementation for a Data-Parallel Skeleton: Formal Derivation and Application to FFT",
journal = "Parallel Processing Letters",
volume = 8,
number = 4,
month = DEC,
year = 1998,
pages = {447--458},
}
@Article{YevCinZhu98:mpi-groundwatersim,
author = {G. Yevi and P. Cinnella and X. Zhuang},
title = {On parallelizing a groundwater pollution simulator},
journal = {Applied Mathematics and Computation},
year = 1998,
volume = 89,
number = {1-3},
month = {Jan.-Feb.},
pages = {313--325},
}



@Article{Ian97:mpi-reducescatter,
author = {G. Iannello},
title = {Efficient algorithms for the reduce-scatter operation in {LogGP}},
journal = {IEEE Transactions on Parallel and Distributed Systesm},
year = 1997,
volume = 8,
number = 9,
month = SEP,
pages = {970--982},
}



@Article{YuaSalBalMel97:mpi-load-balancing,
author = {X. Yuan and G. Salisbury and D. Balsara and R. Melhem},
title = {A load balancing package on distributed memory systems and its application to particle-particle particle-mesh ({P3M}) methods},
journal = {Parallel Computing},
year = 1997,
volume = 23,
number = 10,
month = NOV,
pages = {1525--1544},
}


@Article{FosKohKriCho97:mpi-task-parallel,
author = {I. Foster and D. R. Kohr and R. Krishnaiyer and A. Choudhary},
title = {A library-based approach to task parallelism in a data-parallel language},
journal = {Journal of Parallel and Distributed Computing},
year = 1997,
volume = 45,
number = 2,
month = SEP,
pages = {148--158},
}


@Article{BruGehRei97:mpi-resource-mgmt,
author = {M. Brune and J. Gehring and A. Reinefeld},
title = {Heterogeneous message passing and a link to resource management},
journal = {Journal of Supercomputing},
year = 1997,
volume = 11,
number = 4,
pages = {355--369},
}


@Article{Hor97,
author = {K. Hori},
title = {Supercomputer {SX-4} multinode system},
journal = {NEC Research \& Development},
year = 1997,
volume = 38,
number = 4,
pages = {461--473},
}


@Article{Fac97:mpi-load-balance,
author = {A. Fachat and K. H. Hoffmann},
title = {Implementation of ensemble-based simulated annealing with dynamic load balancing under {MPI}},
journal = {Computer Physics Communications},
year = 1997,
volume = 107,
number = {1--3},
month = DEC,
pages = {49--53},
}


@Article{BarHau98:mpi-app,
author = {E. Baron and P. H. Hauschildt},
title = {Parallel implementation of the phoenix generalized stellar atmosphere program. {II}. Wavelength parallelization},
journal = {Astrophysical Journal},
year = 1998,
volume = 495,
number = {1 part 1},
month = MAR,
pages = {370--376},
}

@Article{Yas98:complex-flows,
author = {O. Yasar},
title = {A scalable model for complex flows},
journal = {Computers and Mathematics with Applications},
year = 1998,
volume = 35,
number = 7,
month = APR,
pages = {117-128},
}


@Article{LepSchHei98:reactive-flow,
author = {J. Lepper and U. Schnell and K. R. G. Hein},
title = {Parallelization of a simulation code for reactive flows on the Intel Paragon},
journal = {Computers and Mathematics with Applications},
year = 1998,
volume = 35,
number = 7,
month = APR,
pages = {101-109},
}


@Article{Gor98:fft,
author = {S. Gorlatch},
title = {Programming with divide-and-conquer skeletons: A case study of {FFT}},
journal = {Journal of Supercomputing},
year = 1998,
volume = 12,
number = {1-2},
pages = {85-97},
}

@Article{Hio98:qcd,
author = {S. Hioki},
title = {{QCDMPI}---pure {QCD} Monte Carlo Simulation code with MPI},
journal = {Nuclear Physics B-Proceedings Supplements},
year = 1998,
volume = 63,
month = APR,
pages = {1000--1002},
}


@Article{Han98:mpi-eval,
author = {P. B. Hansen},
title = {An evaluation of the message-passing interface},
journal = {ACM Sigplan Notices},
year = 1998,
volume = 33,
number = 3,
month = MAR,
pages = {65--72},
}


@Article{Iss98:cfd-precond,
author = {E. Issman},
title = {Non-overlapping preconditioners for a parallel implicit Navier-Stokes solver},
journal = {Future Generation Computer Systems},
year = 1998,
volume = 13,
number = {4--5},
month = MAR,
pages = {303-313},
}


@Article{Bar98:migration,
author = {A. Barak},
title = {The MOSIX multicomputer operating system for high performance cluster computing},
journal = {Future Generation Computer Systems},
year = 1998,
volume = 13,
number = {4--5},
month = MAR,
pages = {361-372},
}


@Article{Rei97:interop,
author = {A. Reinefeld},
title = {Communicating across parallel message-passing environments},
journal = {Journal of Systems Architecture},
year = 1997,
volume = 44,
number = {3--4},
month = DEC,
pages = {261--272},
}

@Article{hom97:mpi-maxcup,
author = {S. Homer},
title = {Design and performance of parallel and distributed approximation algorithms for maxcut},
journal = {Journal of Parallel and Distributed Computing},
year = 1997,
volume = 41,
number = 1,
pages = {48--61},
month = OCT,
}

@Article{War:mpi-cluster,
author = {T. M. Warschko},
title = {ParaStation: Efficient parallel computing by clustering workstations: Design and evaluation},
journal = {Journal of Systems Architecture},
year = 1997,
volume = 44,
number = {3--4},
pages = {241--260},
month = DEC,
}

@Article{War98:mpi-cluster,
author = {T. M. Warschko},
title = {The {ParaStation} project: Using workstations as building blocks for parallel computing},
journal = {Information Sciences},
year = 1998,
volume = 106,
number = {3--4},
pages = {277--292},
month = MAY,
}

@Article{Dan98:mpi-scheduling,
author = {M. A. R. Dantas},
title = {Efficient scheduling of {MPI} applications on networks of workstations},
journal = {Future Generation Computer Systems},
year = 1998,
volume = 13,
number = 6,
pages = {489--499},
month = MAY,
}

@Article{Cou98:mpi-c++,
author = {O. Coulaud},
title = {Para++: A high level {C++} interface for message passing},
journal = {Journal of Parallel and Distributed Computing},
year = 1998,
volume = 51,
number = 1,
pages = {46--62},
month = MAY,
}


@Article{Sal98:mpi-genetic,
author = {A. Salhi},
title = {Parallel implementation of a genetic-programming based tool for symbolic regression},
journal = {Information Processing Letters},
year = 1998,
volume = 66,
number = 6,
pages = {299-307},
month = JUN,
}

@Article{Har98:mpi-application,
author = {H. K. Harbury},
title = {Parallel computation for electronic waves in quantum corrals},
journal = {VLSI Design},
year = 1998,
volume = 6,
number = {1--4},
pages = {57--51},
}

@Article{Jak98:mpi-application,
author = {U. Jakobus},
title = {Analysis of electromagnetic scattering problems by an iterative combination of {MoM} with {GMT} using {MPI} for the communication},
journal = {Microwave and Optical Technology Letters},
year = 1998,
volume = 19,
number = 1,
pages = {1--4},
month = SEP,
}

@Article{Ril98:mpi-application,
author = {C. J. Riley},
title = {Distributed-memory computing with the {L}angley {A}erothermodynamic {U}pwind {R}elaxation {A}lgorithm {(LAURA)}},
journal = {Advances in Engineering Software},
year = 1998,
volume = 29,
number = {3--6},
pages = {317--324},
month = APR-JUL,
}


@Article{Wan98:mpi-application,
author = {P. Wang},
title = {Massively parallel finite volume computation of three-dimensional thermal convective flows},
journal = {Advances in Engineering Software},
year = 1998,
volume = 29,
number = {3--6},
pages = {307--315},
month = APR-JUL,
}

@Article{Dan98:mpi-application,
author = {K. T. Danielson},
title = {Nonlinear dynamic finite element analysis on parallel computers using {FORTRAN} 90 and {MPI}},
journal = {Advances in Engineering Software},
year = 1998,
volume = 29,
number = {3--6},
pages = {179--186},
month = APR-JUL,
}


@Article{Vat98:mpi-application,
author = {V. N. Vatsa},
title = {Viscous pow computations for complex geometries on parallel computers},
journal = {Advances in Engineering Software},
year = 1998,
volume = 29,
number = {3--6},
month = APR-JUL,
}

@Article{Riv98:mpi-application,
author = {W. RiveraGallego},
title = {A genetic algorithm for circulant Euclidean distance matrices},
journal = {Applied Mathematics and Computation},
year = 1998,
volume = 97,
number = {2--3},
pages = {197--208},
month = DEC,
}

@Article{Ada98:mpi-application,
author = {P. Adamidis},
title = {Steel strip production --- a pilot application for coupled simulation with several calculation systems},
journal = {Journal of Materials Processing Technology},
year = 1998,
volume = {80-1},
pages = {330--336},
month = AUG-SEP,
}


@Article{Dow98:mpi-implementation,
author = {P. W. Dowd},
title = {{BLAST}: broadband lightweight {ATM} secure transport for high-performance distributed computing},
journal = {Computer Communications},
year = 1998,
volume = 21,
number = 12,
pages = {1040--1057},
month = AUG,
}

@Article{Kac98:mpi-tool,
author = {P. Kacsuk},
title = {{GRADE}: A graphical programming environment for multicomputers},
journal = {Computers and Artificial Intelligence},
year = 1998,
volume = 17,
number = 5,
pages = {417--427},
}

@Article{Ras98:mpi-application,
author = {J. Rasch},
title = {6-dimensional integrals and supercomputers},
journal = {Computer Physics Communications},
year = 1998,
volume = 114,
number = {1--3},
pages = {378--384},
month = NOV,
}

@Article{Chu98:mpi-balancing,
author = {Y. Chung},
title = {An asynchronous algorithm for balancing unpredictable workload on distributed-memory machines},
journal = {ETRI Journal},
year = 1998,
volume = 20,
number = 4,
pages = {346--360},
month = DEC,
}

@Article{Ber99:mpi-tools,
author = {M. Bertozzi},
title = {Tools for code optimization and system evaluation of the image processing system {PAPRICA-3}},
journal = {Journal of Systems Architecture},
year = 1999,
volume = 45,
number = {6--7},
pages = {519--542},
month = JAN,
}

@Article{Lee99:mpi-applicatin,
author = {P. C. S. Lee},
title = {On the parallelization of a global climate-chemistry modeling system},
journal = {Atmospheric Environment},
year = 1999,
volume = 33,
number = 4,
pages = {675--681},
month = FEB,
}

@Article{May99:mpi-application,
author = {F. May},
title = {Mathematical modelling of glass melting furnace design with regard to {NOx} formation},
journal = {Glastechnische Berichte-Glass Science and Technology},
year = 1999,
volume = 72,
number = 1,
pages = {1--6},
month = JAN,
}

@Article{Reu99:mpi-application,
author = {J. Reuther},
title = {Aerodynamic shape optimization of supersonic aircraft configurations via anadjoint formulation on distributed memory parallel computers},
journal = {Computers and Fluids},
year = 1999,
volume = 28,
number = {4--5},
pages = {675--700},
month = MAY-JUN,
}

@Article{Vat99:mpi-application,
author = {V. N. Vatsa},
title = {Parallelization of a multiblock flow code: an engineering implementation},
journal = {Computers and Fluids},
year = 1999,
volume = 38,
number = {4--5},
pages = {603--614},
month = MAY-JUN,
}

@Article{Dzw99:mpi-application,
author = {W. Dzwinel},
title = {Method of particles in visual clustering of multi-dimensional and large data sets},
journal = {Future Generation Computer Systems},
year = 1999,
volume = 15,
number = 3,
pages = {365--379},
month = APR,
}

@Article{Wan99:mpi-application,
author = {P. Wang},
title = {Parallel multigrid finite volume computation of three-dimensional thermal convection},
journal = {Computers and Mathematics with Applications},
year = 1999,
volume = 37,
number = 9,
pages = {49-60},
month = MAY,
}


@Article{Bar99:mpi-application,
author = {S. T. Barnard},
title = {An {MPI} implementation of the {SPAI} preconditioner on the {T3E}},
journal = {International Journal of High Performance Computing Applications},
year = 1999,
volume = 13,
number = 2,
pages = {107--123},
month = {Summer},
}

@Article{Ree99:mpi-application,
author = {J. S. Reeve},
title = {An efficient parallel version of the {Householder-QL} matrix diagonalisation algorithm},
journal = {Parallel Computing},
year = 1999,
volume = 25,
number = 3,
pages = {311-319},
month = MAR,
}

@Article{Gen99:mpi-application,
author = {C. Gennaro},
title = {Parallelising the Mean Value Analysis algorithm},
journal = {Transactions of the Society for Computer Simulation International},
year = 1999,
volume = 16,
number = 1,
pages = {16--22},
month = MAR,
}

@Article{Ble99:mpi-application,
author = {G. E. Blelloch},
title = {Design and implementation of a practical parallel {D}elaunay algorithm},
journal = {Algorithmica},
year = 1999,
volume = 24,
number = {3--4},
pages = {243--269},
month = JUL-AUG,
}

@Article{Coe99:mpi-application,
author = {P. J. Coelho},
title = {Modelling of a utility boiler using parallel computing},
journal = {Journal of Supercomputing},
year = 1999,
volume = 13,
number = 2,
pages = {211-232},
month = MAR,
}

@Article{Rus99:mpi-cluster,
author = {S. H. Russ},
title = {Using {Hector} to run {MPI} programs over networked workstations},
journal = {Concurrency Practice and Experience},
year = 1999,
volume = 11,
number = 4,
pages = {189--204},
month = APR,
}

@Article{Ros99:mpi-tool,
author = {T. Rossi},
title = {SIAM Journal on Scientific Computing},
journal = {A parallel fast direct solver for block tridiagonal systems with separable matrices of arbitrary dimension},
year = 1999,
volume = 20,
number = 5,
pages = {1778-1796},
month = MAY,
}

@Article{Bou99:mpi-algorithm,
author = {P. Boulet},
title = {Static tiling for heterogeneous computing platforms},
journal = {Parallel Computing},
year = 1999,
volume = 25,
number = 5,
pages = {547--568},
month = MAY,
}

@Article{Ros99:mpi-application,
author = {I. Rosenblum},
title = {Multi-processor molecular dynamics using the {Brenner} potential: Parallelization of an implicit multi-body potential},
journal = {International Journal of Modern Physics C},
year = 1999,
volume = 10,
number = 1,
pages = {189--203},
month = FEB,
}

@Article{Luo99:mpi-comparision,
author = {Y. Luo},
title = {Shared memory vs. message passing: the {COMOPS} benchmark experiment},
journal = {Journal of Supercomputing},
year = 1999,
volume = 13,
number = 3,
pages = {283--301},
month = MAY,
}


@Article{Hio99:mpi-application,
author = {S. Hioki},
title = {{QCDimMPI: MPI} code for {QCD} with an improved action},
journal = {Nuclear Physics B-Proceedings Supplements},
year = 1999,
volume = 73,
pages = {895--897},
month = MAR,
}


@Article{Gol99:mpi-application,
author = {A. Goller},
title = {Parallel processing strategies for large {SAR} image data sets in a distributed environment},
journal = {Computing},
year = 1999,
volume = 62,
number = 4,
pages = {277-291},
}

@Article{Chi99:mpi-implementation,
author = {A. Chien},
title = {Design and evaluation of an {HPVM}-based windows {NT} supercomputer},
journal = {International Journal of High Performance Computing Applications},
year = 1999,
volume = 13,
number = 3,
pages = {201--219},
month = {Fall},
}


@Article{Ros99:mpi-tools,
author = {T. Rossi},
title = {Parallel fictitious domain method for a non-linear elliptic {Neumann} boundary value problem},
journal = {Numerical Linear Algebra with Applications},
year = 1999,
volume = 6,
number = 1,
pages = {51--60},
month = JAN-FEB,
}


@Article{Zak99:mpi-tools,
author = {O. Zaki},
title = {Toward scalable performance visualization with Jumpshot},
journal = {International Journal of High Performance Computing Applications},
year = 1999,
volume = 13,
number = 3,
pages = {277-288},
month = {Fall},
}

@Article{BegVin99:transport,
author = {S. Bergeron and A. Vincent},
title = {Implementation strategies for real-time particle transport solver},
journal = {Computer Physics Communications},
year = 1999,
volume = 120,
number = {2--3},
month = AUG,
pages = {177-184},
}



@Article{BruFagRes99:meta,
author = {M. A. Brune and G. E. Fagg and M. M. Resch},
title = {Message-passing environments for metacomputing},
journal = {Future Generation Computer Systems},
year = 1999,
volume = 15,
number = {5--6},
month = OCT,
pages = {699-712},
}

@Article{ResRanSto99:meta,
author = {M. M. Resch and D. Rantzau and R. Stoy},
title = {Metacomputing experience in a transatlantic wide area application test-bed},
journal = {Future Generation Computer Systems},
year = 1999,
volume = 15,
number = {5--6},
month = OCT,
pages = {807--816},
}


@Article{Tho99:mpi-application,
author = {S. J. Thomas and M. Desgagne and R. Benoit},
title = {A real-time north American forecast at 10-km resolution with the {C}anadian {MC2 Meso-LAM}},
journal = {Journal of Atmospheric and Oceanic Technology},
year = 1999,
volume = 16,
number = 8,
pages = {1092-1101},
month = AUG,
}


@Article{Rod99:mpi-evals,
author = {J. L. Roda and C. Rodriguez and D. G. Morales and E. Almeida},
title = {Predicting the execution time of message passing models},
journal = {Concurrency Practice and Experience},
year = 1999,
volume = 11,
number = 9,
month = AUG,
pages = {461--477},
}

@Article{Lir99:mpi-apps,
author = {I. Lirkov and S. Margenov},
title = {{MPI} parallel implementation of {CBF} preconditioning for {3D} elasticity problems},
journal = {Mathematics and Computers in Simulation},
year = 1999,
volume = 50,
number = {1--4},
month = NOV,
pages = {247--254},
}

@Article{den99:mpi-app,
author = {L. Deng and Z. S. Xie},
title = {Parallelization of {MCNP} Monte Carlo neutron and photon transport code in parallel virtual machine and message passing interface},
journal = {Journal of Nuclear Science and Technology},
year = 1999,
volume = 36,
number = 7,
month = JUL,
}

@Article{Arp99:mpi-app,
author = {K. Arpe and E. Roechner},
title = {Simulation of the hydrological cycle over Europe: Model validation and impacts of increasing greenhouse gases},
journal = {Advances in Water Resources},
year = 1999,
volume = 23,
number = 2,
month = OCT,
pages = {105--119},
}

@Article{Yah99:mpi-app,
author = {Y. Yahagi and M. Mori and Y. Yoshii},
title = {The forest method as a new parallel tree method with the sectional Voronoi tessellation},
journal = {Astrophysical Journal Supplement Series},
year = 1999,
volume = 124,
number = 1,
month = SEP,
pages = {1--9},
}

@Article{tan99:mpi-impl,
author = {H. Tang and K. Shen and T. Yang},
title = {Compile/run-time support for threaded {MPI} execution on multiprogrammed shared memory machines},
journal = {ACM SIGPLAN Notices},
year = 1999,
volume = 34,
number = 8,
month = AUG,
pages = {107--118},
}

@Article{kie99:mpi-collective,
author = {T. Kielmann and R. F. H. Hofman and H. E. Bal and A. Plaat and R. A. F. Bhoedjang},
title = {{MAGPIE: MPI}'s collective communication operations for clustered wide area systems},
journal = {ACM SIGPLAN Notices},
year = 1999,
volume = 34,
number = 8,
month = AUG,
pages = {131-140},
}


@Article{zhu99:mpi-app,
author = {W. J. Zhu and L. Petzold},
title = {Parallel sensitivity analysis for {DAE}s with many parameters},
journal = {Concurrency-Practice and Experience},
year = 1999,
volume = 11,
number = 10,
month = AUG,
pages = {571--585},
}

@Article{Sun99:mpi-perf,
author = {D. Sundaram-Stukel and M. K. Vernon},
title = {Predictive analysis of a wavefront application using {LogGP}},
journal = {ACM SIGPLAN Notices},
year = 1999,
volume = 34,
number = 8,
month = AUG,
pages = {141-150},
}

@Article{kimura99:mpi-app,
author = {T. Kimura and H. Takemiya},
title = {Distributed parallel computing for fluid structure coupled simulations on a heterogeneous parallel computer cluster},
journal = {International Journal of High Performance Computing Applications},
year = 1999,
volume = 13,
number = 4,
pages = {320--333},
}


@Article{morrow99:mpi-app,
author = {P. J. Morrow and D. Crookes and J. Brown and G. McAleese and D. Roantree and I. Spence},
title = {Efficient implementation of a portable parallel programming model for image processing},
journal = {Concurrency-Practice and Experience},
year = 1999,
volume = 11,
number = 11,
month = SEP,
pages = {671--685},
}


@Article{byrne:mpi-app,
author = {G. D. Byrne and A. C. Hindmarsh},
title = {{PVODE}, an {ODE} solver for parallel computers},
journal = {International Journal of High Performance Computing Applications},
year = 1999,
volume = 13,
number = 4,
pages = {354--365},
}


@Article{Coelho:mpi-app,
author = {P. J. Coelho},
title = {Parallel simulation of a utility boiler. Part {I}: Mathematical model and numerical solution method},
journal = {Communications in Numerical Methods in Engineering},
year = 1999,
volume = 15,
number = 10,
month = OCT,
pages = {717--726},
}


@Article{Torres:mpi-app,
author = {D. J. Torres and E. A. Coutsias},
title = {Pseudospectral solution of the two-dimensional {N}avier-{S}tokes equations in a disk},
journal = {SIAM Journal on Scientific Computing},
year = 1999,
volume = 21,
number = 1,
month = SEP,
pages = {378--403},
}


@Article{Ann99:mpi-app,
author = {V. Annamalai and C. S. Krishnamoorthy and V. Kamakoti},
title = {Adaptive finite element analysis on a parallel and distributed environment},
journal = {Parallel Computing},
year = 1999,
volume = 25,
number = 12,
month = NOV,
pages = {1413--1434},
}


@Article{Nagar99:mpi-impl,
author = {S. Nagar and A. Banerjee and A. Sivasubramaniam and C. R. Das},
title = {Alternatives to coscheduling a network of workstations},
journal = {Journal of Parallel and Distributed Computing},
year = 1999,
volume = 59,
number = 2,
month = NOV,
pages = {302--327},
}


@Article{Lappa99:mpi-app,
author = {M. Lappa and R. Savino},
title = {Parallel solution of three-dimensional {M}arangoni flow in liquid bridges},
journal = {International Journal for Numerical Methods in Fluids},
year = 1999,
volume = 31,
number = 6,
month = NOV,
pages = {911--935},
}

@Article{hill99:mpi-app,
author = {R. W. Hill and K. S. Ball},
title = {Parallel implementation of a {F}ourier-{C}hebyshev collocation method for incompressible fluid flow and heat transfer},
journal = {Numerical Heat Transfer Part B},
year = 1999,
volume = 36,
number = 3,
month = {Oct-Nov},
pages = {309--329},
}


@Article{poggi:mpi-extension,
author = {A. Poggi and G. Destri},
title = {{MPOOL}: an object-oriented library for task composition and co-ordination},
journal = {Concurrency-Practice and Experience},
year = 1999,
volume = 11,
number = 14,
month = DEC,
pages = {835--848},
}

@Article{sel99:mpi-app,
author = {P. M. Selwood and M. Berzins},
title = {Parallel unstructured tetrahedral mesh adaptation: algorithms, implementation and scalability},
journal = {Concurrency-Practice and Experience},
year = 1999,
volume = 11,
number = 14,
month = DEC,
pages = {863--884},
}

@Article{meme:mpi-graphics-app,
author = {D. Meneveaux and K. Bouatouch},
title = {Synchronisation and load balancing for parallel hierarchical radiosity of complex scenes on a heterogeneous computer network},
journal = {Computer Graphics Forum},
year = 1999,
volume = 18,
number = 4,
month = DEC,
pages = {201--212},
}

@Article{bova2000:mpi-app,
author = {S. W. Bova and G. F. Carey},
title = {A distributed memory parallel element-by-element scheme for semiconductor device simulation},
journal = {Computer Methods in Applied Mechanics and Engineering},
year = 1999,
volume = 181,
number = 4,
pages = {403--423},
}

@Article{bova2000:mpi-openmp-app,
author = {S. W. Bova and C. P. Breshears and C. E. Cuicchi and Z. Demirbilek and H. A. Gabb},
title = {Dual-level parallel analysis of harbor wave response using {MPI} and {OpenMP}},
journal = {International Journal of High Performance Computing Applications},
year = 2000,
volume = 14,
number = 1,
pages = {49--64},
}

@Article{park99:mpi-app,
author = {N. Park and V. K. Prasanna and C. S. Raghavendra},
title = {Efficient algorithms for block-cyclic array redistribution between processor sets},
journal = {IEEE Transactions on Parallel and Distributed Systems},
year = 1999,
volume = 10,
number = 12,
month = DEC,
pages = {1217--1240},
}

@Article{dan00:mpi-app,
author = {K. T. Danielson and S. Hao and W. K. Liu and R. A. Uras and S. F. Li},
title = {Parallel computation of meshless methods for explicit dynamic analysis},
journal = {International Journal for Numerical Methods in Engineering},
year = 2000,
volume = 47,
number = 7,
month = MAR,
pages = {1323-1341},
}

@Article{mar00:mpi-app,
author = {N. Marco and S. Lanteri},
title = {A two-level parallelization strategy for Genetic Algorithms applied to optimum shape design},
journal = {Parallel Computing},
year = 2000,
volume = 26,
number = 4,
month = MAR,
pages = {377--397},
}


@Article{An00:mpi-app,
author = {R. E. Ansorge and T. A. Carpenter and L. D. Hall and N. R. Shaw and G. B. Williams},
title = {Use of parallel supercomputing to design magnetic resonance systems},
journal = {IEEE Transactions on Applied Superconductivity},
year = 2000,
volume = 10,
number = 1,
month = MAR,
pages = {1368--1371},
}

@InProceedings{cle95:mpi-debugging,
author = {C. Cl\'emen\,con and J. Fritscher and M. J. Meehan and R. R\"uhl},
title = {An Implementation of Race Detection and Deterministic Replay with {MPI}},
booktitle = {Proceedings of Euro-Par'95},
number = 966,
series = {LNCS},
year = 1995,
publisher = {Springer-Verlag},
month = AUG,
pages = {155-166},
meetingloc = {Stockholm, Sweden}
}


@Article{danad00:mpi-app,
author = {K. T. Danielson and M. D. Adley},
title = {A meshless treatment of three-dimensional penetrator targets for parallel computation},
journal = {Computational Mechanics},
year = 2000,
volume = 25,
number = 3,
month = MAR,
pages = {267--273},
}

@Article{kim00:mpi-app,
author = {S. Kim},
title = {Lattice {QCD} on a beowulf cluster},
journal = {Nuclear Physics B-Proceedings Supplements},
year = 2000,
volume = 83,
number = 4,
month = APR,
pages = {807--809},
}

@Article{wat00:mpi-app,
author = {N. Watari and S. Ohnishi and H. Onishi and Y. Iwasawa},
title = {Total energy estimation for {Pd/Al} bimetallic surfaces by a parallel computation scheme},
journal = {Japanese Journal of Applied Physics Part 1---Regular Papers Short Notes \& Review Papers},
year = 2000,
volume = 39,
number = {3A},
month = MAR,
pages = {1457--1461},
}

@Article{rod00:mpi-model,
author = {C. Rodriguez and J. L. Roda and F. Sande and D. G. Morales and F. Almeida},
title = {A new parallel model for the analysis of asynchronous algorithms},
journal = {Parallel Computing},
year = 2000,
volume = 26,
number = 6,
month = MAY,
pages = {753--767},
}

@Article{Lie00:mpi-app,
author = {C. C. Liew and T. Ikeshoji and N. Saito and H. Inomata},
title = {Domain-shifting algorithm: A new domain-decomposition scheme for molecular dynamics simulations on parallel computers},
journal = {Progress of Theoretical Physics Supplement},
year = 2000,
number = 138,
pages = {205--210},
}


@Article{decyk00:mpi-app,
author = {V. K. Decyk and D. E. Dauger and P. R. Kokelaar},
title = {Plasma physics calculations on a parallel {M}acintosh cluster},
journal = {Physica Scripta},
year = 2000,
volume = {T84},
pages = {85--88},
}

@Article{ma99:mpi-app,
author = {S. B. Ma},
title = {Comparisons of the parallel preconditioners on the {CRAY-T3E} for large nonsymmetric linear systems},
journal = {International Journal of High Speed Computing},
year = 1999,
volume = 10,
number = 3,
month = SEP,
pages = {285--300},
}

@Article{pra00:mpi-sim,
author = {S. Prakash and E. Deelman and R. Bagrodia},
title = {Asynchronous parallel simulation of parallel programs},
journal = {IEEE Transactions on Software Engineering},
year = 2000,
volume = 26,
number = 5,
month = {MAY},
pages = {385--400},
}

@Article{gram00:mpi-alg,
author = {M. D. Grammatikakis and S. Liesche},
title = {Priority queues and sorting methods for parallel simulation},
journal = {IEEE Transactions on Software Engineering},
year = 2000,
volume = 5,
number = 26,
month = MAY,
pages = {401--422},
}

@Article{bad00:mpi-app,
author = {S. B. Baden and S. J. Fink},
title = {A programming methodology for dual-tier multicomputers},
journal = {IEEE Transactions on Software Engineering},
year = 2000,
volume = 26,
number = 3,
month = MAR,
pages = {212--226},
}

@Article{gor00:mpi-theory,
author = {S. Gorlatch},
title = {Toward formally-based design of message passing programs},
journal = {IEEE Transactions on Software Engineering},
year = 2000,
volume = 26,
number = 3,
month = MAR,
pages = {276--288},
}

@Article{hos00:mpi-app,
author = {A. Hossinger and E. Langer and S. Selberherr},
title = {Parallelization of a {M}onte {C}arlo ion implantation simulator},
journal = {IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems},
year = 2000,
volume = 19,
number = 5,
month = MAY,
pages = {560--567},
}


@Article{lee00:mpi-app,
author = {J. Y. Lee and J. Pillardy and C. Czaplewski and Y. Arnautova and D. R. Ripoll and A. Liwo and K. D. Gibson and R. J. Wawak and H. A. Scheraga},
title = {Efficient parallel algorithms in global optimization of potential energy functions for peptides, proteins, and crystals},
journal = {Computer Physics Communications},
year = 2000,
volume = 128,
number = {1--2},
month = JUN,
pages = {399--411},
}


@Article{Sri00:mpi-app,
author = {J. Srinivasan and Y. L. Volobuev and S. L. Mielke and D. G. Truhlar},
title = {Parallel {F}ourier Path-integral {M}onte {C}arlo calculations of absolute free energies and chemical equilibria},
journal = {Computer Physics Communications},
year = 2000,
volume = 128,
number = {1--2},
month = JUN,
pages = {446--464},
}

@Article{pra99:mpi-app,
author = {B. Prameela and L. M. Patnaik},
title = {Parallel implementation of alternate quadrant interlocking factorisation method on star topology},
journal = {International Journal of High Speed Computing},
year = 1999,
volume = 10,
number = 4,
month = DEC,
pages = {361--378},
}


@Article{Roy00:mpi-app,
author = {S. Roy and R. Y. Jin and V. Chaudhary and W. L. Hase},
title = {Parallel molecular dynamics simulations of alkane/hydroxylated alpha-aluminum oxide interfaces},
journal = {Computer Physics Communications},
year = 2000,
volume = 128,
number = {1--2},
month = JUN,
pages = {210--218},
}


@Article{fur00:mpi-app,
author = {T. R. Furlani and J. Kong and P. M. W. Gill},
title = {Parallelization of {SCF} calculations within {Q-Chem}},
journal = {Computer Physics Communications},
year = 2000,
volume = 128,
number = {1--2},
month = JUN,
pages = {170--177},
@Article{Fle00:mpi-app,
author = {G. D. Fletcher and M. W. Schmidt and M. S. Gordon},
title = {The Distributed Data Interface in {GAMESS}},
journal = {Computer Physics Communications},
year = 2000,
volume = 128,
number = {1--2},
month = JUN,
pages = {190--200},
}


@Article{She00:mpi-app,
author = {A. I. Shestakov and M. K. Prasad and J. L. Milovich and N. A. Gentile and J. F. Painter and G. Furnish},
title = {The radiation-hydrodynamic {ICF3D} code},
journal = {Computer Methods in Applied Mechanics and Engineering},
year = 2000,
volume = 187,
number = {1--2},
pages = {181--200},
}

% Thanks to Jesper Larsson Traeff of CCRL NEC for the following
%
% Design
%
@inproceedings{Hempel94,
author = {Hempel, Rolf},
title = "The {MPI} Standard for Message Passing",
booktitle = "High--Performance Computing and Networking, InternationalConference and Exhibition, Proceedings, Volume II: Networking and Tools",
editor = {Gentzsch, Wolfgang and Harms, Uwe},
publisher = sv,
series = lncs,
volume = 797,
pages = {247--252},
year = 1994
}

@inproceedings{Hempel94:uberblick,
author = "Hempel, Rolf",
title = "Der {M}essage {P}assing {I}nterface~--~{S}tandard: ein {{\"U}}berblick",
booktitle = "Praxisorientierte {P}arallelverarbeitung,{B}eitr{{\"a}}ge zum 3. {W}orkshop {{\"u}}ber {W}issenschaftliches Rechnen, {S}chwerpunkt {P}raxixorientierte {P}arallelverarbeitung",
editor = "Horst Langend{{\"o}}rfer",
publisher = "Carl {H}anser {V}erlag",
address = "Braunschweig, Germany",
year = 1994
}

@inproceedings{Hempel96,
author = {Rolf Hempel},
title = "The Status of the {MPI} Message-Passing Standard andIts Relation to {PVM}",
booktitle = "{P}arallel {V}irtual {M}achine -- {E}uro{PVM}'96",
editor = "Bode, Arndt and Dongarra, Jack and Ludwig, Thomas andSunderam, Vaidy",
publisher = sv,
series = lncs,
volume = 1156,
pages = {14--21},
year = 1996
}

@Article{HempelWalker99,
Author = {Rolf Hempel and David W. Walker},
Title = "The Emergence of the {MPI} Message Passing Standard forParallel Computing",
Journal = "{C}omputer {S}tandards \& {I}nterfaces",
Publisher = {Elsevier Science},
volume = 21,
year = 1999,
Pages = {51--62}
}

%Implementation
%==============
%
%SX
%--

@inproceedings{Hempel96:mpisx,
author = "Hempel, Rolf",
title = "The {MPI} Message--Passing Standard and its Implementationon the {NEC SX--4}",
booktitle = "Proceedings of the {NEC HPC} Workshop",
editor = "Doi, Shun",
address = "Tokyo, Japan",
year = "1996"
}

@inproceedings{HempelRitzdorfZimmermann97,
Author = {Rolf Hempel and Hubert Ritzdorf and Falk Zimmermann},
Title = "Implementation of {MPI} on {NEC}'s {SX-4} Multi-Node Architecture",
Booktitle = {Recent Advances in Parallel Virtual Machine andMessage Passing Interface. 4th European {PVM/MPI} Users' Group Meeting},
publisher = sv,
Series = lncs,
Volume = 1332,
Year = 1997,
Pages = {185--193},
}

@Article{HempelRitzdorfZimmermann98,
Author = {Rolf Hempel and Hubert Ritzdorf and Falk Zimmermann},
Title = "Efficient Message Passing Interface Implementations for{NEC} Parallel Computers",
Journal = {{NEC} Research \& Development},
Volume = 39,
Number = 4,
Year = 1998,
Pages = {408--413}
}

@inproceedings{TraffHempelRitzdorfZimmermann99,
Author = {Jesper Larsson Tr{\"{a}}ff andRolf Hempel and Hubert Ritzdorf and Falk Zimmermann},
Title = "Flattening on the fly: efficient handling of {MPI} derived datatypes",
Booktitle = {Recent Advances in Parallel Virtual Machine andMessage Passing Interface. 6th European {PVM/MPI} Users' Group Meeting},
publisher = sv,
Series = lncs,
Volume = 1697,
Year = 1999
}

%Cluster etc.
%------------

@inproceedings{GolebiewskiBaumHempel99,
Author = {\fontencoding{T1}\selectfont Maciej {Go\symbol{"AA}\symbol{"A6}biewski}and Markus Baum and Rolf Hempel},
Title = "High Performance Implementation of {MPI} for {Myrinet}",
Booktitle = {Parallel Computation. 4th International Conference of the {ACPC}},
publisher = sv,
Series = lncs,
Volume = 1557,
Year = 1999,
Pages = {510--521}
}

@inproceedings{GolebiewskiHempelTraff99,
Author = {\fontencoding{T1}\selectfont Maciej {Go\symbol{"AA}\symbol{"A6}biewski}and Rolf Hempel and Jesper Larsson Tr{\"{a}}ff},
Title = "Algorithms for collective communication operations on {SMP} clusters",
Booktitle = {The 1999 Workshop on Cluster-Based Computing held in conjunction with 13th {ACM-SIGARCH} International Conference on Supercomputing{(ICS'99)}},
Pages = {11--15},
Year = 1999
}

@inproceedings{BaumGolebiewskiHempelTraff99,
Author = {Markus Baum and\fontencoding{T1}\selectfont Maciej {Go\symbol{"AA}\symbol{"A6}biewski} and Rolf Hempel and Jesper Larsson Tr{\"{a}}ff},
Title = "Dual-device {MPI} Implementation for {PC} Clusters with {SMP} Nodes",
Booktitle = {{MPIDC'99} Message Passing Interface Developer's and User'sConference Journal of Papers and Presentations},
Pages = {53--60},
Year = 1999
}

@inproceedings{GolebiewskiBasermannBaumHempelRitzdorfTraff99,
Author = {\fontencoding{T1}\selectfont M. {Go\symbol{"AA}\symbol{"A6}biewski}and A. Basermann and M. Baum and R. Hempel and H. Ritzdorf and J. L. Tr{\"{a}}ff},
Title = "A {PC} Cluster with Application-Quality {MPI}",
Booktitle = {Euro-Par'99 Parallel Processing},
publisher = sv,
Series = lncs,
Volume = 1685,
Year = 1999,
Pages = {613--623},
}

%Tools
%=====

@inproceedings{HempelZimmermann96,
author = {R. Hempel and F. Zimmermann},
title = "On the automatic {PARMACS-to-MPI} transformation in application programs",
booktitle = "High-performance computing and networking:international conference and exhibition, {HPCN EUROPE} 1966, Brussels, Belgium, April 15--19, 1996: proceedings",
publisher = sv,
series = lncs,
volume = 1067,
year = 1996,
pages = {1033--1034}
}

@Article{HempelZimmermann99,
author = {Hempel, Rolf and Zimmermann, Falk},
title = "Automatic Migration from {PARMACS} to {MPI} in Parallel {F}ortran Applications",
journal = "{S}cientific {P}rogramming",
volume = 20,
number = 7,
year = 1999,
pages = {39--46}
}

@inproceedings{ReussnerTraffHunzelmann00,
Author = {Ralf Reussner and Jesper Larsson Tr{\"{a}}ff and Gunnar Hunzelmann},
Title = "A Benchmark for {MPI} Derived Datatypes",
Booktitle = {Recent Advances in Parallel Virtual Machine andMessage Passing Interface. 7th European {PVM/MPI} Users' Group Meeting},
Series = lncs,
Year = 2000,
Note = {To appear}
}

@inproceedings{FahringerGerndtRileyTraff00,
Author = {Thomas Fahringer and Michael Gerndt and Graham Riley andJesper Larsson Tr{\"{a}}ff},
Title = "Specification of Performance Problems in {MPI} Programs with {ASL}",
Booktitle = {International Conference in Parallel Processing {(ICPP'00)}},
Year = 2000,
Note = {To appear}
}

%Applications
%============

@inproceedings{Traff98,
Author = {Jesper Larsson Tr{\"{a}}ff},
Title = "Portable Randomized List Ranking on Multiprocessors using {{\sf MPI}}",
Booktitle = {Recent Advances in Parallel Virtual Machine andMessage Passing Interface. 5th European {PVM/MPI} Users' Group Meeting},
publisher = sv,
Series = lncs,
Volume = {1497},
Year = 1998,
Pages = {395--402}
}

%
% End of articles from NEC

@Article{bak00:mpi-app,
author = {J. Baker and M. Shirel},
title = {Ab initio quantum chemistry on PC-based parallel supercomputers},
journal = {Parallel Computing},
year = 2000,
volume = 26,
number = {7--8},
month = JUL,
pages = {1011--1024},
}

@Article{nob00:mpi-app,
author = {R. H. Nobes and A. P. Rendell and J. Nieplocha},
title = {Computational chemistry on {F}ujitsu vector-parallel processors: Hardware and programming environment},
journal = {Parallel Computing},
year = 2000,
volume = 26,
number = {7--8},
month = JUL,
pages = {869--886},
}


@Article{fru00:mpi-app,
author = {H. A. Fruchtl and R. H. Nobes and A. Bliznyuk},
title = {Performance of {MOPAC} on parallel computers},
journal = {Journal of Molecular Structure-Theochem},
year = 2000,
volume = 506,
number = {spec. SI},
month = JUL,
pages = {87--97},
}

@Article{geo00:mpi-impl,
author = {W. L. George and J. G. Hagedorn and J. E. Devaney},
title = {{IMPI}: Making {MPI} interoperable},
journal = {Journal of Research of the National Institute of Standards and Technology},
year = 2000,
volume = 105,
number = 3,
pages = {343+},
month = {May-June},
}

@TechReport{kon00:mpi-measurement,
author = {Alice E. Koniges and Rolf Rabenseifner and Karl Solchenbach},
title = {Benchmark Design for Characterization of Balanced High-Performance Architectures},
institution = {},
year = 2000
}


@Article{kanTam:mpi-app,
author = {R. Kanapady and K. K. Tamma},
title = {A unified family of generalized integration operators [GInO] for non-linearstructural dynamics: implementation aspects},
journal = {Advances in Engineering Software},
year = 2000,
volume = 31,
number = {8--9},
pages = {639--647},
month = {Aug-Sep},
}


@Article{Gur00:mpi-app,
author = {G. P. Guruswamy},
title = {{HiMAP}: a portable super modular multilevel parallel multidisciplinary process for large scale analysis},
journal = {Advances in Engineering Software},
year = 2000,
volume = 31,
number = {8--9},
pages = {617--620},
month = {Aug-Sep},
}

@Article{cfkl00:mpi-java,
author = {B. Carpenter and G. Fox and S. H. Ko and S. Lim},
title = {Object serialization for marshaling data in a {J}ava interface to {MPI}},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 7,
pages = {539--553},
month = JUN,
}

@Article{g-l00:mpi-app,
author = {A. J. Garcia-Loureiro and T. F. Pena and J. M. Lopez-Gonzalez and L. Prat},
title = {Parallel finite element method to solve the 3{D} {P}oisson equation and its application to abrupt heterojunction bipolar transistors},
journal = {International Journal for Numerical Methods in Engineering},
year = 2000,
volume = 49,
number = 5,
pages = {639--652},
month = OCT,
}


@Article{sch00:mpi-app,
author = {W. Schneider and P. J. McCarthy and K. Lackner and O. Gruber and K. Behler and P. Martin and R. Merkel},
title = {{ASDEX} Upgrade {MHD} equilibria reconstruction on distributed workstations},
journal = {Fusion Engineering and Design},
year = 2000,
volume = 48,
number = {1--2},
pages = {127--134},
month = AUG,
}

@Article{ave00:mpi-app,
author = {A. Averbuch and B. Epstein and L. Ioffe and I. Yavneh},
title = {Efficient parallelization of a three-dimensional {N}avier-{S}tokes solver on {MIMD} multiprocessors},
journal = {Journal of Supercomputing},
year = 2000,
volume = 17,
number = 2,
pages = {123--142},
month = SEP,
}


@Article{vNie00:rmi-grid,
author = {R. van Nieuwpoort and J.Maassen and H. E. Bal and T. Kielmann and R. Veldema},
title = {Wide-area parallel programming using the remote method invocation model},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 8,
pages = {643--666},
month = JUL,
annote = {Special Issue?},
}


@Article{pha00:mpi-app,
author = {S. Phadke and D. Bhardwaj and S. K. Dey},
title = {An explicit predictor-corrector solver with application to seismic wave modelling},
journal = {Computers \& Geosciences},
year = 2000,
volume = 26,
number = {9--10},
pages = {1053--1058},
month = {Nov.-Dec.},
}

@Article{oli00:mpi-app-compare,
author = {L, Oliker and R. Biswas},
title = {Parallelization of a dynamic unstructured algorithm using three leading programming paradigms},
journal = {IEEE Transactions on Parallel and Distributed Systems},
year = 2000,
volume = 11,
number = 9,
pages = {931--940},
month = SEP,
}


@Article{pro00:mpi-impl,
author = {B. V. Protopopov and A. Skjellum},
title = {Shared-memory communication approaches for an {MPI} message-passing library},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 9,
pages = {799-820},
month = AUG,
}


@Article{dec00:mpi-app,
author = {T. Decker},
title = {Virtual data space - load balancing for irregular applications},
journal = {Parallel Computing},
year = 2000,
volume = 26,
number = {13--14},
pages = {1825--1860},
month = DEC,
}

@Article{duan00:mpi-app,
author = {S. Duan and K. S. Anderson},
title = {Parallel implementation of a low order algorithm for dynamics of multibody systems on a distributed memory computing system},
journal = {Engineering with Computers},
year = 2000,
volume = 16,
number = 2,
pages = {96--108},
}

@Article{nam00:mpi-app,
author = {A. Namazifard and I. D. Parsons},
title = {An {MPI} parallel implementation of {N}ewmark's method},
journal = {Computer-Aided Civil and Infrastructure Engineering},
year = 2000,
volume = 15,
number = 3,
pages = {189--195},
month = MAY,
}

@Article{chp00:prgm-devlp,
author = {B. Chapman and J. Merlin and D. Pritchard and F. Bodin and Y. Mevel and T. Sorevik and L. Hill},
title = {Program development tools for clusters of shared memory multiprocessors},
journal = {Journal of Supercomputing},
year = 2000,
volume = 17,
number = 3,
pages = {311--322},
month = NOV,
}

@Article{getov00:mpi-java,
author = {V. S. Getov and P. A. Gray and V. S. Sunderam},
title = {Aspects of portability and distributed execution for {JNI}-wrapped message passing libraries},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 11,
pages = {1039--1050},
month = SEP,
}

@Article{smith00:mpi-openmp,
author = {L. Smith and P. Kent},
title = {Development and performance of a mixed {OpenMP/MPI} quantum {M}onte {C}arlo code},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 12,
pages = {1121--1129},
month = OCT,
}

@Article{hotta00:mpi-app,
author = {A. Hotta and H. Ninokata and A. J. Baratta},
title = {Development of parallel coupling system between three-dimensional nodal kinetic code {ENTREE} and two-fluid plant simulator {TRAC/BF1}},
journal = {Journal of Nuclear Science and Technology},
year = 2000,
volume = 37,
number = 10,
pages = {840--854},
month = OCT,
}

@Article{silva00:mpi-java,
author = {L. M. Silva and P. Martins and J. G. Silva},
title = {Heterogeneous parallel computing using {Java} and {WMPI}},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 11,
pages = {1077-1091},
month = SEP,
}


@Article{thir00:mpi-impl,
author = {G. K. Thiruvathukal and P. M. Dickens and S. Bhatti},
title = {Java on networks of workstations ({JavaNOW}): a parallel computing framework inspired by {Linda} and the {M}essage {P}assing {I}nterface ({MPI})},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 11,
pages = {1093--1116},
month = SEP
}

@Article{thir00:mpi-java,
author = {G. K. Thiruvathukal and P. M. Dickens and S. Bhatti},
title = {Java on networks of workstations ({JavaNOW}): a parallel computing framework inspired by {Linda} and the {M}essage {P}assing {I}nterface ({MPI})},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 11,
pages = {1093--1116},
month = SEP,
}

@Article{carp00:mpi-java,
author = {B. Carpenter and V. Getov and G. Judd and A. Skjellum and G. Fox},
title = {{MPJ: MPI}-like message passing for {Java}},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 11,
pages = {1019--1038},
month = SEP,
}


@Article{wall00:mpi-openmp,
author = {A. J. Wallcraft},
title = {{SPMD OpenMP} versus {MPI} for ocean models},
journal = {Concurrency-Practice and Experience},
year = 2000,
volume = 12,
number = 12,
pages = {1155-1164},
month = OCT,
}

@Article{qia00:mpi-app,
author = {J. Qiang and R. D. Ryne and S. Habib},
title = {Fortran implementation of object-oriented design in parallel beam dynamics simulations},
journal = {Computer Physics Communications},
year = 2000,
volume = 133,
number = 1,
pages = {18--33},
month = DEC,
}


@Article{hu00:openmp,
author = {Y. C. Hu and H. H. Lu and A. L. Cox and W. .Zwaenepoel},
title = {{OpenMP} for networks of {SMP}s},
journal = {Journal of Parallel and Distributed Computing},
year = 2000,
volume = 60,
number = 12,
pages = {1512--1530},
month = DEC,
}

@Article{kry01:mpi-app,
author = {P. Krysl and Z. Bittnar},
title = {Parallel explicit finite element solid dynamics with domain decomposition and message passing: dual partitioning scalability},
journal = {Computers and Structures},
year = 2001,
volume = 79,
number = 3,
pages = {345--360},
month = JAN,
}

@Article{leg00:mpi-applibs,
author = {P. F. Leggett and S. P. Johnson and M. Cross},
title = {{CAPLib} - a `thin layer' message passing library to support computational mechanics codes on distributed memory parallel systems},
journal = {Advances in Engineering Software},
year = 2000,
volume = 32,
number = 1,
pages = {61--83},
month = DEC
}

@Article{sad01:mpi-app,
author = {M. Sadeghi and F. Liu},
title = {Computation of mistuning effects on cascade flutter},
journal = {AIAA Journal},
year = 2001,
volume = 39,
number = 1,
pages = {22--28},
month = JAN,
}


@Article{gull01:mpi-app,
author = {A. S. Gullerud and R. H. Dodds},
title = {{MPI}-based implementation of a {PCG} solver using an {EBE} architecture and preconditioner for implicit, 3-{D} finite element analysis},
journal = {Computers and Structures},
year = 2001,
volume = 79,
number = 5,
pages = {553--575},
month = FEB,
}



@Article{scot01:mpi-app,
author = {J. A. Scott},
title = {A parallel frontal solver for finite element applications},
journal = {International Journal for Numerical Methods in Engineering},
year = 2001,
volume = 50,
number = 5,
pages = {1131--1144},
month = FEB,
}

@Article{alta01:mpi-eval,
author = {K. Al-Tawil and C. A. Moritz},
title = {Performance modeling and evaluation of {MPI}},
journal = {Journal of Parallel and Distributed Computing},
year = 2001,
volume = 61,
number = 2,
pages = {202--223},
}

@Article{grif00:mpi-app,
author = {L. W. Griffin and D. J. Dorney},
title = {Simulations of the unsteady flow through the Fastrac supersonic turbine},
journal = {Journal of Turbomachinery-Transactions of the ASME},
year = 2000,
volume = 122,
number = 2,
pages = {225--233},
month = APR,
}

@Article{des01:mpi-app,
author = {J. C. Desplat and I. Pagonabarraga and P. Bladon},
title = {{LUDWIG: A} parallel {L}attice-{B}oltzmann code for complex fluids},
journal = {Computer Physics Communications},
year = 2001,
volume = 134,
number = 3,
pages = {273--290},
month = MAR,
}

@Article{tan00:mpi-impl,
author = {H. Tang and K. Shen and T. Yang},
title = {Program transformation and runtime support for threaded {MPI} execution on shared-memory machines},
journal = {ACM Transactions on Programming Languages and Systems},
year = 2000,
volume = 22,
number = 4,
pages = {673--700},
month = JUL,
}

@Article{dim01:mpi-app,
author = {I. Dimov and V. Alexandrov and A. Karaivanova},
title = {Parallel resolvent Monte Carlo algorithms for linear algebra problems},
journal = {Mathematics and Computers in Simulation},
year = 2001,
volume = 55,
number = {1-3},
pages = {25--35},
month = FEB,
}

@Article{luCai01:mpi-app,
author = {Q. M. Lu and D. S. Cai},
title = {Implementation of parallel plasma particle-in-cell codes on {PC} cluster},
journal = {Computer Physics Communications},
year = 2001,
volume = 135,
number = 1,
pages = {93--104},
month = MAR,
}

@Article{yas01:mpi-app,
author = {O. Yasar},
title = {A new ignition model for spark-ignited engine simulations},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = {1--2},
pages = {179--200},
month = JAN,
}


@Article{lin01:mpi-graphics,
author = {W. S. Lin and R. W. H. Lau and K. Hwang and X. L. Lin and P. Y. S. Cheung},
title = {Adaptive parallel rendering on multiprocessors and workstation clusters},
journal = {IEEE Transactions on Parallel and Distributed Systems},
year = 2001,
volume = 12,
number = 3,
pages = {241--258},
month = MAR,
}

@Article{got01:mpi-openmp-app,
author = {S. Gottlieb and S. Tamhankar},
title = {Benchmarking {MILC} code with {OpenMP} and {MPI}},
journal = {Nuclear Physics B-Proceedings Supplements},
year = 2001,
number = 94,
pages = {841--845},
month = MAR,
}


@Article{cha00:mpi-app,
author = {T. Chan and V. Eijkhout},
title = {Design of a library of parallel preconditioners},
journal = {International Journal of High Performance Computing Applications},
year = 2000,
volume = 14,
number = 2,
pages = {91--101},
month = {Summer},
}


@Article{gro00:mpi-app,
author = {W. Gropp and D. Keyes and L. C. McInnes and M. D. Tidriri},
title = {Globalized {N}ewton-{K}rylov-{S}chwarz algorithms and software for parallel implicit {CFD}},
journal = {International Journal of High Performance Computing Applications},
year = 2000,
volume = 14,
number = 2,
pages = {102--136},
month = {Summer},
}


@Article{man01:mpi-app-perf,
author = {J. W. Manke and G. D. Kerlick and D. Levine and S. Banerjee and E. Dillon},
title = {Parallel performance of two applications in the {B}oeing high performance computing benchmark suite},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 4,
pages = {457--475},
month = MAR,
}


@Article{bag01:mpi-perf,
author = {R. Bagrodia and E. Deelman and T. Phan},
title = {Parallel simulation of large-scale parallel applications},
journal = {International Journal of High Performance Computing Applications},
year = 2001,
volume = 15,
number = 1,
pages = {3--12},
month = {Spring},
}


@Article{hoe01:mpi-openmp,
author = {J. Hoeflinger and P. Alavilli and T. Jackson and B. Kuhn},
title = {Producing scalable performance with {OpenMP}: {E}xperiments with two {CFD} applications},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 4,
pages = {391--413},
month = MAR,
}

@Article{wal01:mpi-app,
author = {R. L. Walker},
title = {Search engine case study: searching the web using genetic programming and {MPI}},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 1,
pages = {71--89},
month = JAN,
}


@Article{dij01:mpi-app,
author = {F. Dijkstra and J. H. van Lenthe},
title = {Software news and updates - Parallel valence bond},
journal = {Journal of Computational Chemistry},
year = 2001,
volume = 6,
number = 22,
pages = {665--672},
month = APR,
}


@Article{den01:mpi-sys,
author = {Y. F. Deng and A. Korobka},
title = {The performance of a supercomputer built with commodity components},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = {1--2},
pages = {91--108},
month = JAN,
}


@Article{cap01:mpi-smp-perf,
author = {F. Cappello and O. Richard and D. Etiemble},
title = {Understanding performance of {SMP} clusters running {MPI} programs},
journal = {Future Generation Computer Systems},
year = 2001,
volume = 17,
number = 6,
pages = {711-720},
month = APR,
}


@Article{he01:mpi-app,
author = {Y. He and C. H. Q. Ding},
title = {Using accurate arithmetics to improve numerical reproducibility and stability in parallel applications},
journal = {Journal of Supercomputing},
year = 2001,
volume = 18,
number = 3,
pages = {259--277},
month = MAR,
}

@Article{pro01:mpi-impl,
author = {B. V. Protopopov and A. Skjellum},
title = {A multithreaded message passing interface ({MPI}) architecture: Performance and program issues},
journal = {Journal of Parallel and Distributed Computing},
year = 2001,
volume = 61,
number = 4,
pages = {449--466},
month = APR,
}


@Article{cun01:mpi-app,
author = {R. D. da Cunha and A. L. de Bortoli},
title = {A parallel {N}avier-{S}tokes solver for the rotating flow problem},
journal = {Concurrency and Computation-Practice \& Experience},
year = 2001,
volume = 13,
number = 3,
pages = {163--180},
month = MAR,
}

@Article{swan01:mpi-app,
author = {C. A. Swann},
title = {Software for parallel computing: The {LAM} implementation of {MPI}},
journal = {Journal of Applied Econometrics},
year = 2001,
volume = 16,
number = 2,
pages = {185--194},
month = {Mar-Apr},
}


@Article{reis01:mpi-app,
author = {T. G. Reisin and S. C. Wurzler},
title = {Implementation of a numerical solution of the multicomponent kinetic collection equation ({MKCE}) on parallel computers},
journal = {Journal of Parallel and Distributed Computing},
year = 2001,
volume = 61,
number = 5,
pages = {641--661},
month = MAY,
}

@Article{guif01:mpi-app,
author = {C. Guiffaut and K. Mahdjoubi},
title = {A parallel {FDTD} algorithm using the {MPI} library},
journal = {IEEE Antennas and Propagation Magazine},
year = 2001,
volume = 43,
number = 2,
pages = {94--103},
month = APR,
}

@Article{yao01:mpi-app,
author = {J. X. Yao and A. Jameson and J. J. Alonso and F. Liu},
title = {Development and validation of a massively parallel flow solver for turbomachinery flows},
journal = {Journal of Propulsion and Power},
year = 2001,
volume = 17,
number = 3,
pages = {659--668},
month = {May-June},
}


@Article{kom01:mpi-app,
author = {Y. Komeiji and M. Haraguchi and U. Nagashima},
title = {Parallel molecular dynamics simulation of a protein},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 8,
pages = {977-987},
month = JUL,
}
}


@Article{mar01:mpi-style,
author = {B. Di Martino and A. Mazzeo and N. Mazzocca and U. Villano},
title = {Parallel program analysis and restructuring by detection of point-to-point interaction patterns and their transformation into collective communication constructs},
journal = {Science of Computer Programming},
year = 2001,
volume = 40,
number = {2-3},
pages = {235--263},
month = JUL,
}


@Article{lee01:mpi-app,
author = {M. Lee and W. Liu and V. K. Prasanna},
title = {Parallel implementation of a class of adaptive signal processing applications},
journal = {Algorithmica},
year = 2001,
volume = 30,
number = 4,
pages = {645--684},
month = AUG,
}


@Article{take01:mpi-eval,
author = {K. Takeda and N. K. Allsopp and J. C. Hardwick and P. C. Macey and D. A. Nicole and S. J. Cox and D. J. Lancaster},
title = {An assessment of {MPI} environments for windows {NT}},
journal = {Journal of Supercomputing},
year = 2001,
volume = 19,
number = 3,
pages = {315--323},
}


@Article{chun01:mpi-app,
author = {S. H. Chung and H. C. Kwon and K. R. Ryu and Y. Chung and H. Jang and C. A. Choi},
title = {Information retrieval on an {SCI}-based {PC} cluster},
journal = {Journal of Supercomputing},
year = 2001,
volume = 19,
number = 3,
pages = {251--265},
}


@Article{pic01:mpi-app,
author = {S. M. Pickles and J. M. Brooke and F. C. Costen and E. Gabriel and M. Muller and M. Resch and S. M. Ord},
title = {Metacomputing across intercontinental networks},
journal = {Future Generation Computer Systems},
year = 2001,
volume = 17,
number = 8,
pages = {911--918},
month = JUN,
}


@Article{sha01:mpi-model,
author = {H. Z. Shan and J. P. Singh},
title = {A comparison of {MPI}, {SHMEM} and cache-coherent shared address space programming models on a tightly-coupled multiprocessors},
journal = {International Journal of Parallel Programming},
year = 2001,
volume = 29,
number = 3,
pages = {283--318},
month = JUN,
}


@Article{dem01:mpi-extension,
author = {E. D. Demaine and I. Foster and C. Kesselman and M. Snir},
title = {Generalized communicators in the message passing interface},
journal = {IEEE Transactions on Parallel and Distributed Systems},
year = 2001,
volume = 16,
number = 6,
pages = {610--616},
month = JUN,
}


@Article{tro01:mpi-app,
author = {R. Trobec and M. Sterk and M. Praprotnik and D. Janezic},
title = {Implementation and evaluation of {MPI}-based parallel {MD} program},
journal = {International Journal of Quantum Chemistry},
year = 2001,
volume = 84,
number = 1,
pages = {23--31},
month = JUL,
}


@Article{ahm01:mpi-alg,
author = {I. Ahmad},
title = {A distributed algorithm for finding prime compatibles on network of workstations},
journal = {Microprocessors and Microsystems},
year = 2001,
volume = 25,
number = 4,
pages = {195--202},
month = JUN,
}


@Article{ino01:mpi-model,
author = {F. Ino and N. Fujimoto and K. Hagihara},
title = {{LogGPS}: A parallel computational model for synchronization analysis},
journal = {ACM SIGPLAN Notices},
year = 2001,
volume = 36,
number = 7,
pages = {133--142},
month = JUL,
}


@Article{zha01:mpi-app,
author = {W. S. Zhang and G. Q. Zhang},
title = {Prestack depth migration by hybrid method with high precision and its parallel implementation},
journal = {Chinese Journal of Geophysics-Chinese Edition},
year = 2001,
volume = 44,
number = 4,
pages = {542--551},
month = JUL,
}



@Article{ant01:mpi-xxx,
author = {G. Antoniu and L. Bouge and P. Hatcher and M. MacBeth and K. McGuigan and R. Namyst},
title = {The {H}yperion system: Compiling multithreaded {J}ava bytecode for distributed execution},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 10,
pages = {1279--1297},
month = SEP,
}

@Article{sar01:mpi-app,
author = {K. C. Sarma and H. Adeli},
title = {Bilevel parallel genetic algorithms for optimization of large steel structures},
journal = {Computer-Aided Civil and Infrastructure Engineering},
year = 2001,
volume = 16,
number = 5,
pages = {295--304},
month = SEP,
}

@Article{yil01:mpi-app,
author = {E. Yilmaz, E and M. S. Kavsaoglu and H. U. Akay and I. S. Akmandor},
title = {Cell-vertex based parallel and adaptive explicit 3{D} flow solution on unstructured grids},
journal = {International Journal of Computational Fluid Dynamics},
year = 2001,
volume = 14,
number = 4,
pages = {271--286},
}


@Article{cha01:mpi-app,
author = {H. Y. Chang and K. C. Huang and C. Y. Shen and S. C. Tcheng and C. Y. Chou},
title = {Parallel computation of a weather model in a cluster environment},
journal = {Computer-Aided Civil and Infrastructure Engineering},
year = 2001,
volume = 16,
number = 5,
pages = {365--373},
month = SEP,
}

@Article{bgl00:mpi-impl,
author = {Ralph Butler and William Gropp and Ewing Lusk},
title = {Components and Interfaces of a Process Management System for Parallel Programs},
journal = {Parallel Computing},
month = OCT,
year = 2001,
volume = 27,
number = 11,
pages = {1417--1429},
}


@Article{myl01:mpi2-impl,
author = {S. Moh and C. S. Yu and B. Lee and H. Y. Youn and D. S. Han and D. Lee},
title = {Four-ary tree-based barrier synchronization for 2{D} meshes without nonmember involvement},
journal = {IEEE Transactions on Computers},
year = 2001,
volume = 50,
number = 8,
pages = {811-823},
month = AUG,
}


@Article{fbd01:mpi-impl,
author = {G. E. Fagg and A. Bukovsky and J. J. Dongarra},
title = {{HARNESS} and fault tolerant {MPI}},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 11,
pages = {1479--1495},
month = OCT,
}


@Article{kbg01:mpi-impl,
author = {T. Kielmann and H. E. Bal and S. Gorlatch and K. Verstoep and R. F. H. Hofman},
title = {Network performance-aware collective communication for clustered wide-area systems},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 11,
pages = {1431--1456},
month = OCT,
}


@Article{ll01:mpi-openmp,
author = {G. R. Luecke and W. H. Lin},
title = {Scalability and performance of {OpenMP} and {MPI} on a 128-processor {SGI} {Origin2000}},
journal = {Concurrency and Computation-Practice \& Experience},
year = 2001,
volume = 13,
number = 10,
pages = {905--928},
month = AUG,
}


@Article{pas01:mpi-app,
author = {G. Passoni and P. Cremonesi and G. Alfonsi},
title = {Analysis and implementation of a parallelization strategy on a {N}avier-{S}tokes solver for shear flow simulations},
journal = {Parallel Computing},
year = 2001,
volume = 27,
number = 13,
pages = {1665--1685},
month = DEC,
}


@Article{ber01:mpi-openmp,
author = {J. Y. Berthou and E. Fayolle},
title = {Comparing {OpenMP}, {HPF}, and {MPI} programming: A study case},
journal = {International Journal of High Performance Computing Applications},
year = 2001,
volume = 15,
number = 3,
pages = {297--309},
}


@Article{ber01:mpi-alg,
author = {L. Bergamaschi and I. Moret and G. Zilli},
title = {Inexact {Q}uasi-{N}ewton methods for sparse systems of nonlinear equations},
journal = {Future Generation Computer Systems},
year = 2001,
volume = 18,
number = 1,
pages = {41--53},
month = SEP,
}



@Article{neo01:mpi-tool,
author = {N. Neophytou and P. Evripidou},
title = {{Net-dbx}: A web-based debugger of {MPI} programs over low-bandwidth lines},
journal = {IEEE Transactions on Parallel and Distributed Systems},
year = 2001,
volume = 12,
number = 9,
pages = {986--995},
month = SEP,
}


@Article{ree01:mpi-alg,
author = {J. S. Reeve and A. D. Scurr and J. H. Merlin},
title = {Parallel versions of {S}tone's strongly implicit algorithm},
journal = {Concurrency and Computation-Practice \& Experience,},
year = 2001,
volume = 13,
number = 12,
pages = {1049--1062},
month = OCT,
}


@Article{kre01:mpi-app,
author = {H. Kremer and F. May and S. Wirtz},
title = {The influence of furnace design on the {NO} formation in high temperature processes},
journal = {Energy Conversion and Management},
year = 2001,
volume = 42,
number = {15--17},
pages = {1937--1952},
month = {Oct-Nov},
}


@Article{he01:mpi-alg,
author = {X. He and C. H. Huang},
title = {Communication efficient {BSP} algorithm all nearest smaller values problem},
journal = {Journal of Parallel and Distributed Computing},
year = 2001,
volume = 61,
number = 10,
pages = {1425--1438},
month = OCT,
}


@Article{bea01:mpi-app,
author = {O. Beaumont and V. Boudet and F. Rastello and Y. Robert},
title = {Matrix multiplication on heterogeneous platforms},
journal = {IEEE Transactions on Parallel and Distributed Systems},
year = 2001,
volume = 12,
number = 10,
pages = {1033-1051},
month = OCT,
}


@Article{ban01:mpi-impl,
author = {M Banikazemi and R. K. Govindaraju and R. Blackmore and D. K. Panda},
title = {MPI-LAPI: An efficient implementation of MPI for IBM RS/6000 SP systems},
journal = {IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS},
year = 2001,
volume = 12,
number = 10,
pages = {1081--1093},
month = OCT,
}


@Article{liRa01:mpi-app,
author = {M. Z. Li and O. F. Rana and D. W. Walker},
title = {Wrapping {MPI}-based legacy codes as {Java/CORBA} components},
journal = {Future Generation Computer Systems},
year = 2001,
volume = 18,
number = 2,
pages = {213--223},
month = OCT,
}

@Article{beau01:mpi-app,
author = {O. Beaumont and V. Boudet and A. Petitet and F. Rastello and Y. Robert},
title = {A proposal for a heterogeneous cluster {ScaLAPACK} (dense linear solvers)},
journal = {IEEE Transactions on Computers},
year = 2001,
volume = 50,
number = 10,
pages = {1052--1070},
month = OCT,
}

@Article{corn01:mpi-app,
author = {C. F. Cornwell and L. T. Wille and Y. G. Wu and F. H. Sklar},
title = {Parallelization of an ecological landscape model by functional decomposition},
journal = {Ecological Modelling},
year = 2001,
volume = 144,
pages = {13-20},
month = OCT,
}


@Article{sama01:mpi-app,
author = {M. Y. Saman and D. J. Evans},
title = {Distributed computing on cluster systems},
journal = {International Journal of Computer Mathematics},
year = 2001,
volume = 78,
number = 3,
pages = {383--397},
}


@Article{raas01:mpi-app,
author = {S. Raasch and M. Schroter},
title = {{PALM}---{A} large-eddy simulation model performing on massively parallel computers},
journal = {Meteorologische Zeitschrift},
year = 2001,
volume = 10,
number = 5,
pages = {363--372},
}

@Article{lu01:mpi-app,
author = {P. Lu},
title = {Integrating bulk-data transfer into the {A}urora distributed shared data system},
journal = {Journal of Parallel and Distributed Computing},
year = 2001,
volume = 61,
number = 11,
pages = {1609--1632},
month = NOV,
}

@Article{brig01:mpi-impl,
author = {R. Brightwell and S. Plimpton},
title = {Scalability and performance of two large {L}inux clusters},
journal = {Journal of Parallel and Distributed Computing},
year = 2001,
volume = 61,
number = 11,
pages = {1546--1569},
month = NOV,
}


@Article{diPi01:mpi-app,
author = {M. Di Pierro},
title = {Matrix distributed processing: a set of {C++} tools for implementing generic lattice computations on parallel systems},
journal = {Computer Physics Communications},
year = 2001,
volume = 141,
number = 1,
pages = {98--148},
month = NOV,
}

@Article{ahan01:mpi-app,
author = {X. Zhang and B. Wang and Z. Z. Ji},
title = {Performance of a parallel finite difference atmospheric general circulation model},
journal = {Advances in Atmospheric Sciences},
year = 2001,
volume = 18,
number = 6,
pages = {1175--1184},
}

@Article{boul01:mpi-app,
author = {C. Bouldin and J. Sims and H. Hung and J. J. Rehr and A. L. Ankudinov},
title = {Rapid calculation of x-ray absorption near edge structure using parallel computation},
journal = {X-Ray Spectrometry},
year = 2001,
volume = 30,
number = 6,
pages = {431--434},
month = {Nov.-Dec.},
}

@Article{behr01:mpi-app,
author = {M. Behr},
title = {Stabilized space-time finite element formulations for free-surface flows},
journal = {Communications in Numerical Methods in Engineering},
year = 2001,
volume = 17,
number = 11,
pages = {813--819},
month = NOV,
}


@Article{he02:mpi-app,
author = {F. S. He and H. Wu},
title = {An efficient parallel implementation of the {E}verglades {L}andscape {F}ire {M}odel using checkpointing},
journal = {Parallel Computing},
year = 2002,
volume = 28,
number = 1,
pages = {65--82},
month = JAN,
}

@Article{soda02:mpi-app,
author = {A. C. Sodan},
title = {Applications on a multithreaded architecture: A case study with {EARTH-MANNA}},
journal = {Parallel Computing},
year = 2002,
volume = 28,
number = 1,
pages = {3--33},
month = JAN,
}

@Article{wang02:mpi-app,
author = {P. Wang and K. Y. Liu and T. Cwik and R. Green},
title = {{MODTRAN} on supercomputers and parallel computers},
journal = {PARALLEL COMPUTING},
year = 2002,
volume = 28,
number = 1,
pages = {53--64},
month = JAN,
}

@Article{acac02:mpi-impl,
author = {M. Acacio and O. Canovas and J. M. Garcia and P. E. Lopez-de-Teruel},
title = {{MPI-Delphi}: an {MPI} implementation for visual programming environments and heterogeneous computing},
journal = {Future Generation Computer Systems},
year = 2002,
volume = 18,
number = 3,
pages = {317--333},
month = JAN,
}

@Article{thak02:mpi-impl,
author = {R. Thakur and W. Gropp and E. Lusk},
title = {Optimizing noncontiguous accesses in {MPI-IO}},
journal = {Parallel Computing},
year = 2002,
volume = 28,
number = 1,
pages = {83--105},
month = JAN,
}

@Article{hell02:mpi-impl,
author = {H. Hellwagner and M. Ohlenroth},
title = {{VI} architecture communication features and performance on the {G}iganet cluster {LAN}},
journal = {Future Generation Computer Systems},
year = 2002,
volume = 18,
number = 3,
pages = {421--433},
month = JAN,
}

@Article{liLi01:mpi-app,
author = {Y. M. Li and J. L. Liu and T. S. Chao and S. M. Sze},
title = {A new parallel adaptive finite volume method for the numerical simulation of semiconductor devices},
journal = {Computer Physics Communications},
year = 2001,
volume = 142,
number = {1--3},
pages = {285--289},
month = DEC,
}

@Article{iovi01:mpi-app,
author = {M. Iovieno and C. Cavazzoni and D. Tordella},
title = {A new technique for a parallel dealiased pseudospectral {N}avier-{S}tokes code},
journal = {Computer Physics Communications},
year = 2001,
volume = 141,
number = 3,
pages = {365--374},
month = DEC,
}

@Article{kepk01:mpi-app,
author = {A. Kepkep and U. Ravaioli and B. Winstead},
title = {Cluster-based parallel 3-{D} {M}onte {C}arlo device simulation},
journal = {VLSI Design},
year = 2001,
volume = 13,
number = {1--4},
pages = {51--56},
}

@Article{beck02:mpi-app,
author = {M. Be\v{c}ka and G. Ok\v{s}a and M. Vajter\v{s}ic},
title = {Dynamic ordering for a parallel block-Jacobi SVD algorithm},
journal = {Parallel Computing},
year = 2002,
volume = 28,
number = 2,
pages = {243--262},
month = FEB,
}

@Article{lian02:mpi-app,
author = {Y. Liang and J. Weston and M. Szularz},
title = {Generalized least-squares polynomial preconditioners for symmetric indefinite linear equations},
journal = {Parallel Computing},
year = 2002,
volume = 28,
number = 2,
pages = {323--341},
month = FEB,
}

@Article{beka02:mpi-app,
author = {C. Bekas and E. Gallopoulos},
title = {Parallel computation of pseudospectra by fast descent},
journal = {Parallel Computing},
year = 2002,
volume = 28,
number = 2,
pages = {223--242},
month = FEB,
}

@Article{jian02:mpi-app,
author = {D. Jiang and W. Meleis and M. El-Shenawee and E. Mizan and A. Ashouei and C. Rappaport},
title = {Parallel implementation of the steepest descent fast multipole method ({SDFMM}) on a {B}eowulf cluster for subsurface sensing applications},
journal = {IEEE Microwave and Wireless Components Letters},
year = 2002,
volume = 12,
number = 1,
pages = {24--26},
month = JAN,
}


@Article{dehn02:mpi-app,
author = {F. Dehne and T. Eavis and S. Hambrusch and A. Rau-Chaplin},
title = {Parallelizing the data cube},
journal = {Distributed and Parallel Databases},
year = 2002,
volume = 11,
number = 2,
pages = {181--201},
month = MAR,
}

@Article{dewa02:mpi-app,
author = {Y. K. Dewaraja and M. Ljungberg and A. Majumdar and A. Bose and K. F. Koral},
title = {A parallel {M}onte {C}arlo code for planar and {SPECT} imaging: implementation, verification and applications in {I-131 SPECT}},
journal = {Computer Methods and Programs in Biomedicine},
year = 2002,
volume = 67,
number = 2,
pages = {115--124},
month = FEB,
}

@Article{slot02:mpi-app,
author = {J. Slottow and A. Shahriari and M. Stein and X. Chen and C. Thomas and P. B. Ender},
title = {Instrumenting and tuning {dataView} - a networked application for navigating through large scientific datasets},
journal = {Software-Practice \& Experience},
year = 2002,
volume = 32,
number = 2,
pages = {165--190},
month = FEB,
}

@Article{shan02:mpi-openmp,
author = {H. Z. Shan and J. P. Singh and L. Oliker and R. Biswas},
title = {A comparison of three programming models for adaptive applications on the {Origin2000}},
journal = {Journal of Parallel and Distributed Computing},
year = 2002,
volume = 62,
number = 2,
pages = {241--266},
month = FEB,
}

@Article{tan02:mpi-app,
author = {C. J. K. Tan},
title = {Solving systems of linear equations with relaxed {M}onte {C}arlo method},
journal = {Journal of Supercomputing},
year = 2002,
volume = 22,
number = 1,
pages = {111--123},
month = MAY,
}

@Article{chen01:mpi-app,
author = {D. Chen and T. Aoki and N. Homma and T. Higuchi},
title = {Pragmatic method for the design of fast constant-coefficient combinational multipliers},
journal = {IEEE Proceedings-Computers and Digital Techniques},
year = 2001,
volume = 148,
number = 6,
pages = {196--206},
month = NOV,
}

@Article{marc02:mpi-app,
author = {C. D. Marcos and P. Barge and R. D. Marcos},
title = {Dust dynamics in protoplanetary disks: Parallel computing with {PVM}},
journal = {Journal of Computational Physics},
year = 2002,
volume = 176,
number = 2,
pages = {276--294},
month = MAR,
}

@Article{ozyo02:mpi-app,
author = {Y. Ozyoruk},
title = {Parallel computation of forward radiated noise of ducted fans with acoustic treatment},
journal = {AIAA Journal},
year = 2002,
volume = 40,
number = 3,
pages = {450--455},
month = MAR,
}

@InProceedings{Jones97,
author = "Chris R. Jones and Ambuj K. Singh and Divyakant Agrawal",
title = "Low Latency {MPI} for Meiko {CS}/2 and {ATM} Clusters",
booktitle = "Proceedings of the 11th International Parallel Processing Symposium (IPPS'97)",
publisher = "The Institute of Electrical and Electronics Engineers",
address = "Geneva, Switzerland",
month = apr,
year = "1997",
keywords = "CD-ROM, I/O and Message Passing,",
}

@InProceedings{Dowd96,
author = "P. W. Dowd and T. M. Carrozzi and F. A. Pellegrino and A. X. Chen",
title = "Native {ATM} Application Programmer Interface Testbed for Cluster-Based Computing",
booktitle = "Proc. 10th Int. Parallel Processing Symp. (IPPS'96) CD-ROM",
publisher = "IEEE",
address = "Honolulu, HA",
month = apr,
year = "1996",
keywords = "Clusters and Domain Decomposition,",
}

@Article{Cotronis:1998:DMA,
author = "Y. Cotronis",
title = "Developing Message-Passing Applications on {MPICH} under Ensemble",
journal = "Lecture Notes in Computer Science",
volume = "1497",
pages = "145--??",
year = "1998",
coden = "LNCSD9",
ISSN = "0302-9743",
bibdate = "Tue Jan 5 08:21:58 MST 1999",
acknowledgement = ack-nhfb,
}

@InProceedings{Roy:2000:MGQ,
author = "Alain J. Roy and Ian Foster and William Gropp and Nicholas Karonis and Volker Sander and Brian Toonen",
title = "{MPICH-GQ}: Quality-of-Service for Message Passing Programs",
editor = "{ACM}",
booktitle = "{SC2000}: High Performance Networking and Computing. Dallas Convention Center, Dallas, {TX}, {USA}, November 4--10, 2000",
publisher = "ACM Press and IEEE Computer Society Press",
address = "New York, NY 10036, USA and 1109 Spring Street, Suite 300, Silver Spring, MD 20910, USA",
pages = "54--54",
year = "2000",
bibdate = "Mon Feb 12 11:57:43 2001",
url = "http://www.sc2000.org/proceedings/techpapr/papers/pap234.pdf",
acknowledgement = ack-nhfb,
}


@InProceedings{IPDPS01*51,
author = "Olivier Aumage and Guillaume Mercier and Raymond Namyst",
title = "{MPICH/Madeleine}: a True {Multi-Protocol} {MPI} for High Performance Networks",
pages = "51--51",
booktitle = "Proceedings of the 15th International Parallel \& Distributed Processing Symposium ({IPDPS}-01)",
month = apr # " ~23--27",
publisher = "IEEE Computer Society",
address = "Los Alamitos, CA",
year = "2001",
}

@InProceedings{LINUX-00*353,
author = "Hong Ong and Paul A. Farrell",
title = "Performance Comparison of {LAM/MPI}, {MPICH}, and {MVICH} on a Linux Cluster Connected by a Gigabit Ethernet Network",
pages = "353--362",
booktitle = "Proceedings of the 4th Annual Showcase \& Conference ({LINUX}-00)",
month = oct # " ~10--14",
publisher = "The USENIX Association",
address = "Berkeley, CA",
year = "2000",
}

@Article{Gropp:1997:SMC,
author = "W. Gropp and E. Lusk",
title = "Sowing {MPICH}: {A} Case Study in the Dissemination of a Portable Environment for Parallel Scientific Computing",
journal = "The International Journal of Supercomputer Applications and High Performance Computing",
volume = "11",
number = "2",
pages = "103--114",
month = "Summer",
year = "1997",
coden = "IJSCFG",
ISSN = "1078-3482",
bibdate = "Thu Jun 26 18:17:48 1997",
acknowledgement = ack-nhfb,
}

@Article{Gropp97,
author = "William Gropp and Ewing Lusk",
title = "A high-performance {MPI} implementation on a shared-memory vector supercomputer",
journal = "Parallel Computing",
volume = "22",
number = "11",
pages = "1513--1526",
month = jan,
year = "1997",
keywords = "practical aspects/experiences; message-passing interface; shared memory multiprocessor; NEC SX-4; MPICH; performance; implementation;",
}

@InProceedings{Foster98a,
author = "Ian Foster and Nicholas T. Karonis",
title = "A Grid-Enabled {MPI}: Message Passing in Heterogeneous Distributed Computing Systems",
booktitle = "Proceedings of Supercomputing'98 (CD-ROM)",
publisher = "ACM SIGARCH and IEEE",
address = "Orlando, FL",
month = nov,
year = "1998",
keywords = "metacomputing, Message Passing Interface, MPI, Globus, computational grids, metacomputing, MPICH,",
}

@TechReport{Nog96,
author = "Saurab Nog and David Kotz",
title = "A Performance Comparison of {TCP}/{IP} and {MPI} on {FDDI}, Fast Ethernet, and Ethernet",
institution = "Dartmouth",
number = "PCS-TR95-273",
month = jan,
year = "1996",
keywords = "latency / bandwidth measurements for MPI/Ethernet,",
url = "http://www.cs.dartmouth.edu/reports/abstracts/PCS-TR95-273.html",
}

@TechReport{ncstrl.cornell.tc//96-239,
type = "Technical Report",
number = "96-239",
title = "Multi{MATLAB}: {MATLAB} on Multiple Processors",
language = "English",
month = may,
notes = "PostScript",
pages = "16",
year = "1996",
bibdate = "May 30, 1996",
author = "Anne E. Trefethen and Vijay S. Menon and Chi-Chao Chang and Grezgorz J. Czajkowski and Chris Myers and Lloyd N. Trefethen",
}

@InProceedings{Bhandarkar:1996:MPM,
author = "M. A. Bhandarkar and L. V. Kale",
title = "{MICE}: a prototype {MPI} implementation in {Converse} environment",
editor = "{IEEE}",
booktitle = "Proceedings. Second {MPI} Developer's Conference: Notre Dame, {IN}, {USA}, 1--2 July 1996",
publisher = "IEEE Computer Society Press",
address = "1109 Spring Street, Suite 300, Silver Spring, MD 20910, USA",
year = "1996",
ISBN = "0-8186-7533-0",
pages = "26--31",
bibdate = "Sat Apr 19 16:34:54 MDT 1997",
acknowledgement = ack-nhfb,
classification = "C6110P (Parallel programming); C6115 (Programming support); C6150E (General utility programs); C6150N (Distributed systems software)",
conftitle = "Proceedings. Second MPI Developer's Conference",
corpsource = "Dept. of Comput. Sci., Illinois Univ., Urbana, IL, USA",
keywords = "Abstract Device Interface; application program interfaces; communication; computations; Converse interoperable parallel programming environment; message managers; message passing; MICE; MPI modules; MPICH; multi-threaded MPI programs; open systems; parallel programming; programming environments; prototype MPI implementation; public-domain MPI implementation; PVM interoperation; thread objects; utility programs",
sponsororg = "IEEE Comput. Soc. Tech. Committee on Distributed Process",
treatment = "P Practical",
}

@TechReport{UTEXAS_CS//CS-TR-95-22,
year = "1995",
type = "Technical Report",
number = "CS-TR-95-22",
institution = "University of Texas, Austin",
title = "Fast Collective Communication Libraries, Please",
bibdate = "November 24, 98",
url = "ftp://ftp.cs.utexas.edu/pub/techreports/tr95-22.ps.Z",
author = "Prasenjit Mitra and David Payne and Lance Shuler and Robert van de Geijn and Jerrell Watts",
}

@InProceedings{Skjellum:1996:TTM,
author = "A. Skjellum and B. Protopopov and S. Hebert",
title = "A thread taxonomy for {MPI}",
editor = "{IEEE}",
booktitle = "Proceedings. Second {MPI} Developer's Conference: Notre Dame, {IN}, {USA}, 1--2 July 1996",
publisher = "IEEE Computer Society Press",
address = "1109 Spring Street, Suite 300, Silver Spring, MD 20910, USA",
year = "1996",
ISBN = "0-8186-7533-0",
pages = "50--57",
bibdate = "Sat Apr 19 16:34:54 MDT 1997",
acknowledgement = ack-nhfb,
classification = "C6110B (Software engineering techniques); C6110F (Formal methods); C6150E (General utility programs); C6150J (Operating systems); C6150N (Distributed systems software)",
conftitle = "Proceedings. Second MPI Developer's Conference",
corpsource = "Dept. of Comput. Sci., Mississippi State Univ., MS, USA",
keywords = "API extensions; application program interfaces; Channel Device; computational unit; fine-grain concurrency; formal specification; message passing; minimal portable thread management; MPI; MPICH; multi-threaded thread-safe ADI; non-thread-safe MPI call semantics; resource container; software portability; synchronisation; synchronization mechanisms; thread models; thread safety; thread taxonomy; user-level mechanism; utility programs; Windows NT version",
sponsororg = "IEEE Comput. Soc. Tech. Committee on Distributed Process",
treatment = "P Practical",
}

@Article{Foster:1997:MMC,
author = "Ian Foster and Jonathan Geisler and Carl Kesselman and Steven Tuecke",
title = "Managing Multiple Communication Methods in High-Performance Networked Computing Systems",
journal = "Journal of Parallel and Distributed Computing",
volume = "40",
number = "1",
pages = "35--48",
day = "10",
month = jan,
year = "1997",
coden = "JPDCER",
ISSN = "0743-7315",
bibdate = "Thu Mar 9 09:19:01 MST 2000",
url = "http://www.idealibrary.com/links/doi/10.1006/jpdc.1996.1266/production; http://www.idealibrary.com/links/doi/10.1006/jpdc.1996.1266/production/pdf; http://www.idealibrary.com/links/doi/10.1006/jpdc.1996.1266/production/ref",
acknowledgement = ack-nhfb,
classification = "B6150M (Protocols); B6210L (Computer communications); C5440 (Multiprocessing systems); C5470 (Performance evaluation and testing); C5640 (Protocols); C5670 (Network performance)",
corpsource = "Div. of Math. and Comput. Sci., Argonne Nat. Lab., IL, USA",
doi = "10.1006/jpdc.1996.1266",
keywords = "Argonne MPICH library; computer networks; computing systems; criteria; heterogeneous networked environment; high-performance networked; message passing; message passing interface; multimethod communication; multiple communication methods; multithreaded runtime system; networked computing environments; Nexus; Nexus-based MPI implementation; performance characteristics; performance evaluation; protocols; remote service request mechanisms; transport mechanisms; user-specified selection",
treatment = "P Practical",
}

@InProceedings{Foster:1996:MIW,
author = "I. Foster and J. Geisler and S. Tuecke",
title = "{MPI} on the {I-WAY}: a wide-area, multimethod implementation of the {Message Passing Interface}",
editor = "{IEEE}",
booktitle = "Proceedings. Second {MPI} Developer's Conference: Notre Dame, {IN}, {USA}, 1--2 July 1996",
publisher = "IEEE Computer Society Press",
address = "1109 Spring Street, Suite 300, Silver Spring, MD 20910, USA",
year = "1996",
ISBN = "0-8186-7533-0",
pages = "10--17",
bibdate = "Sat Apr 19 16:34:54 MDT 1997",
acknowledgement = ack-nhfb,
classification = "C5620W (Other computer networks); C6110B (Software engineering techniques); C6115 (Programming support); C6130S (Data security); C6150E (General utility programs); C6150N (Distributed systems software)",
conftitle = "Proceedings. Second MPI Developer's Conference",
corpsource = "Argonne Nat. Lab., IL, USA",
keywords = "application program interfaces; authentication; automatic configuration mechanisms; communication mechanisms; geographically distributed computing resources; geographically distributed database resources; geographically distributed graphics resources; geographically distributed networking; heterogeneous systems; high-speed wide-area networks; I-WAY distributed- computing experiment; message authentication; message passing; Message Passing Interface; MPICH; Nexus multithreaded runtime system; parallel programming; portable high-performance programming model; process creation; programming environments; software environment; software libraries; utility programs; wide area networks",
sponsororg = "IEEE Comput. Soc. Tech. Committee on Distributed Process",
treatment = "P Practical",
}

@InProceedings{EVL-1999-99,
year = "1999",
title = "Numerical Relativity in a Distributed Environment",
author = "W. Benger and I. Foster and J. Novotny and E. Seidel and J. Shalf and W. Smith and P. Walker",
url = "http://visinfo.zib.de/EVlib/Show?EVL-1999-99",
}

@Article{Gropp:1996:HPP,
author = "William Gropp and Ewing Lusk and Nathan Doss and Anthony Skjellum",
title = "High-performance, portable implementation of the {MPI} {Message Passing Interface Standard}",
journal = "Parallel Computing",
volume = "22",
number = "6",
pages = "789--828",
day = "20",
month = sep,
year = "1996",
coden = "PACOEJ",
ISSN = "0167-8191",
bibdate = "Fri Aug 6 10:15:01 MDT 1999",
url = "http://www.elsevier.com/cgi-bin/cas/tree/store/parco/cas_sub/browse/browse.cgi?year=1996&;volume=22&issue=6&aid=1075",
acknowledgement = ack-nhfb,
affiliation = "Argonne Natl Lab",
affiliationaddress = "Argonne, IL, USA",
classification = "722.2; 722.4; 723; 723.1; 723.2; 902.2; C6110B (Software engineering techniques); C6110P (Parallel programming); C6115 (Programming support); C6150N (Distributed systems software)",
corpsource = "Div. of Math. and Comput. Sci., Argonne Nat. Lab., IL, USA",
journalabr = "Parallel Comput",
keywords = "applications; Computer programming; Computer software portability; Data communication systems; design goal; distribution; environments; free; future developments; high-performance portable implementation; Interfaces (computer); library writers; message passing; Message passing interface; MPI message; MPI-2; MPICH; parallel computer vendors; Parallel processing systems; parallel programming; Parallel programming environment; passing interface standard; portable parallel programming environment; programming; project management; software libraries; software performance evaluation; software portability; software standards; software tools; specialists; specification; standard library; Standards",
treatment = "P Practical",
}

@InProceedings{Husbands98,
author = "Parry J. Husbands and James C. Hoe",
title = "{MPI}-Star{T}: Delivering Network Performance to Numerical Applications",
booktitle = "Proceedings of Supercomputing'98 (CD-ROM)",
publisher = "ACM SIGARCH and IEEE",
address = "Orlando, FL",
month = nov,
year = "1998",
keywords = "networks, MPI, MPICH, MITMatlab, StarT-X, performance, clustering, SMP,",
}

@TechReport{ncstrl.cornell.tc//95-228,
type = "Technical Report",
number = "95-228",
title = "{ARCH}, An Object-Oriented Library for Asynchronous and Loosely Synchronous System Programming",
language = "English",
month = dec,
notes = "PostScript",
pages = "144",
year = "1995",
bibdate = "December 28, 1995",
author = "Jean-Marc Adamo",
}

@InProceedings{ThakurGroLus99,
author = "Rajeev Thakur and William Gropp and Ewing Lusk",
title = "Data Sieving and Collective {I/O} in {ROMIO}",
booktitle = "Proceedings of Frontiers '99: The 7th Symposium on the Frontiers of Massively Parallel Computation",
address = "Annapolis, Maryland",
organization = "IEEE Computer Society",
month = feb # " 21--25,",
year = "1999",
pages = "182--189",
}

@InProceedings{Thakur98,
author = "Rajeev S. Thakur and William Gropp and Ewing Lusk",
title = "A Case for Using {MPI}'s Derived Datatypes to Improve {I}/{O} Performance",
booktitle = "Proceedings of Supercomputing'98 (CD-ROM)",
publisher = "ACM SIGARCH and IEEE",
address = "Orlando, FL",
month = nov,
year = "1998",
keywords = "parallel I/O, MPI-IO,",
}

@InProceedings{thakur:mpi-io-implement,
author = "Rajeev Thakur and William Gropp and Ewing Lusk",
title = "On Implementing {MPI-IO} Portably and with High Performance",
booktitle = "Proceedings of the Sixth Workshop on Input/Output in Parallel and Distributed Systems",
year = "1999",
month = may,
pages = "23--32",
earlier = "thakur:mpi-io-implement-tr",
url = "http://www.mcs.anl.gov/~thakur/papers/mpio-impl.ps",
keyword = "parallel I/O, multiprocessor file system interface, pario-bib",
}

@TechReport{ercim.inria.publications//RR-3461,
pages = "36 p.",
type = "Technical Report",
number = "RR-3461",
institution = "Inria, Institut National de Recherche en Informatique et en Automatique",
title = "Application Interfaces to {BPFS}: a Basic Parallel File System",
bibdate = "July 1, 1998",
author = "Robert D. Russell",
language = "A",
}


@InProceedings{schmuck02:IO-GPFS,
author = {Frank Schmuck and Roger Haskin},
title = {{GPFS}: A Shared-Disk File System for Large Computing Clusters},
booktitle = {First Usenix Conference on File and Storage Technologies (FAST)},
year = 2002,
month = JAN,
annote = {Meeting held in Monteray, CA, January 28--30}
}


@Article{adve02:mpi-impl,
author = {V.S. Adve and R. Bagrodia and E. Deelman and R. Sakellariou},
title = {Compiler-optimized simulation of large-scale applications on high performance architectures},
journal = {Journal of Parallel and Distributed Computing},
year = 2002,
volume = 62,
number = 3,
pages = {393--426},
month = MAR,
}


@Article{tana02:mpi-app,
author = {H. Tanaka and M. Takata and E. Nishibori and K. Kato and T. Iishi and M. Sakata},
title = {{ENIGMA}: maximum-entropy method program package for huge systems},
journal = {Journal of Applied Crystallography},
year = 2002,
volume = 35,
pages = {282--286},
month = APR,
}

@Article{bosi02:mpi-impl,
author = {G. Bosilca and G. Fedak and F. Cappello},
title = {{OVM}: Out-of-order execution parallel virtual machine},
journal = {Future Generation Computer Systems},
year = 2002,
volume = 18,
number = 4,
pages = {525--537},
month = MAR,
}

@Article{lars02:mpi-app,
author = {D. J. Larson and J. S. Nasstrom},
title = {Shared- and distributed-memory parallelization of a {L}agrangian atmospheric dispersion model},
journal = {Atmospheric Environment},
year = 2002,
volume = 36,
number = 9,
pages = {1559--1564},
month = MAR,
}

@Article{choe02:mpi-app,
author = {S. Choe and S. Muroya and A. Nakamura and C. Nonaka and T. Saito and R. Shoji},
title = {Lattice tool kit in {Fortran90}},
journal = {Nuclear Physics B-Proceedings Supplements},
year = 2002,
volume = 106,
pages = {1037--1039},
month = MAR,
}

@Article{bach02:mpi-app,
author = {F. W. Bach and H. Haferkamp and A. Kuhlmeyer and M. Niemeyer},
title = {Monte-Carlo simulation of dislocation networks using the message passing interface},
journal = {Modelling and Simulation in Materials Science and Engineering},
year = 2002,
volume = 10,
number = 2,
pages = {215--225},
month = MAR,
}

@Article{bark02:mpi-app,
author = {K. Barker and N. Chrisochoides and J. Dobbelaere and D. Nave and K. Pingali},
title = {Data Movement and Control Substrate for parallel adaptive applications},
journal = {Concurrency and Computation-Practice \& Experience},
year = 2002,
volume = 14,
number = 2,
pages = {77--101},
month = FEB,
}

@Article{lei02:mpi-app,
author = {W. Lei and H. C. Yin and B. P. Wang and L. S. Tong},
title = {Optimization of a particle optical system in a mutilprocessor environment},
journal = {Nuclear Instruments \& Methods in Physics Research Section A-Accelerators Spectrometers Detectors and Associated Equipment},
year = 2002,
volume = 479,
number = {2--3},
pages = {611--617},
month = MAR,
}

@Article{khas02:mpi-app,
author = {S. A. Khashan and D. O. Ogbe and T. M. Jiang},
title = {Development and optimization of parallel code for large-scale petroleum reservoir simulation},
journal = {Journal of Canadian Petroleum Technology},
year = 2002,
volume = 41,
number = 4,
pages = {33--38},
month = APR,
}


@Article{alia02a:mpi-app,
author = {S. Aliabadi and A. Johnson and B. Zellars and A. Abatan and C. Berger},
title = {Parallel simulation of flows in open channels},
journal = {Future Generation Computer Systems},
year = 2002,
volume = 18,
number = 5,
pages = {627--637},
month = APR,
}


@Article{berz02:mpi-app,
author = {P. K. Berzigiyarov and V. A. Zayets and I. Y. Ginzburg and V. F. Razumov and E. F. Sheka},
title = {{NANOPACK}: Parallel codes for semiempirical quantum chemical calculations of large systems in the sp- and spd-basis},
journal = {International Journal of Quantum Chemistry},
year = 2002,
volume = 88,
number = 4,
pages = {449--462},
month = JUN,
}

@Article{gosw02:mpi-use,
author = {D. Goswami and A. Singh and B. R. Preiss},
title = {From design patterns to parallel architectural skeletons},
journal = {Journal of Parallel and Distributed Computing},
year = 2002,
volume = 62,
number = 4,
pages = {669--695},
month = APR,
}


@Article{anku02:mpi-app,
author = {A. L. Ankudinov and C. E. Bouldin and J. J. Rehr and J. Sims and H. Hung},
title = {Parallel calculation of electron multiple scattering using {L}anczos algorithms},
journal = {Physical Review B},
year = 2002,
volume = 6510,
number = 10,
pages = {4107--4107},
month = MAR,
}

@Article{gall02:mpi-app,
author = {J. A. Gallud and J. Garcia-Consuegra and A. Martinez},
title = {Distributed processing of remotely sensed {Landsat-TM} imagery using {MPI}},
journal = {Cluster Computing},
year = 2002,
pages = {15-22}
}

@Article{alia02:mpi-app,
author = {S. Aliabadi and A. Abatan and A. Johnson and J. Abedi and Y. Yeboah and K. Bota},
title = {Stabilized finite element formulation of buoyancy driven incompressible flows},
journal = {Communications in Numerical Methods in Engineering},
year = 2002,
volume = 18,
number = 5,
pages = {315--324},
month = MAY,
}

@Article{mo02:mpi-app,
author = {Z. Y. Mo and J. L. Zhang and Q. D. Cai},
title = {Dynamic load balancing for short-range parallel molecular dynamics simulations},
journal = {International Journal of Computer Mathematics},
year = 2002,
volume = 79,
number = 2,
pages = {165--177},
month = FEB,
}


@Article{deit02:parallel-lang,
author = {S. J. Deitz and B. L. Chamberlain and L. Snyder},
title = {High-level language support for user-defined reductions},
journal = {Journal of Supercomputing},
year = 2002,
volume = 23,
number = 1,
pages = {23--37},
month = AUG,
}


@Article{mohr02:mpi-openmp,
author = {B. Mohr and A. D. Malony and S. Shende and F. Wolf},
title = {Design and prototype of a performance tool interface for {OpenMP}},
journal = {Journal of Supercomputing},
year = 2002,
volume = 23,
number = 1,
pages = {105--128},
month = AUG,
}

@Article{nak02:mpi-app,
author = {K. Nakajima and H. Okuda},
title = {Parallel iterative solvers for unstructured grids using a directive/{MPI} hybrid programming model for the {GeoFEM} platform on {SMP} cluster},
journal = {Concurrency and Computation-Practice \& Experience},
year = 2002,
volume = 14,
number = {6--7},
pages = {411-429},
month = {May-June},
}


@Article{tri02:mpi-app,
author = {N. Trivedi and J. Bischof and S. Davis and K. Pedretti and T. E. Scheetz and T. A. Braun and C. A. Roberts and N. L. Robinson and V. C. Sheffield and A. B. Soares and T. L Casavant},
title = {Parallel creation of non-redundant gene indices from partial {mRNA} transcripts},
journal = {Future Generation Computer Systems},
year = 2002,
volume = 18,
number = 6,
pages = {863--870},
month = MAY,
}


@Article{stan02:mpi-model,
author = {N. Stankovic and K. Zhang},
title = {A distributed parallel programming framework},
journal = {IEEE Transactions on Software Engineering},
year = 2002,
volume = 28,
number = 5,
pages = {478--493},
month = MAY,
}

@Article{ong02:mpi-impl,
author = {E. Ong},
title = {MPI ruby: Scripting in a parallel environment},
journal = {Computing in Science \& Engineering},
year = 2002,
volume = 4,
number = 4,
pages = {78--82},
month = {July-Aug}
}

@Article{tad02:mpi-app,
author = {M. Tadjfar and R. Himeno},
title = {Time-accurate, parallel, multi-zone, multi-block solver to study the human cardio-vascular system},
journal = {Biorheology},
year = 2002,
volume = 39,
number = {3--4},
pages = {379--384},
}


@Article{anon02:mpi-models,
author = {Anonymous},
title = {Message passing},
journal = {Parallel and Distributed Computing: A Survey of Models, Paradigms and Approaches},
year = 2002,
pages = {95--109}
}


@Article{sei02:mpi-tools,
author = {F. J. Seinstra and D. Koelma},
title = {{P-3PC}: {A} point-to-point communication model for automatic and optimal decomposition of regular domain problems},
journal = {IEEE Transactions on Parallel and Distributed Systems},
year = 2002,
volume = 13,
number = 7,
pages = {758--768},
month = JUL,
}

@Article{vit02:mpi-app,
author = {J. E. Vitela and U. R. Hanebutte and J. L. Gordillo and L. M. Cortina},
title = {Comparative performance study of parallel programming models in a neural network training code},
journal = {International Journal of Modern Physics C},
year = 2002,
volume = 13,
number = 4,
pages = {429--452},
month = MAY,
}

@Article{wan02:mpi-app,
author = {Y. Wang and A. M. Cuitino},
title = {Full-field measurements of heterogeneous deformation patterns on polymeric foams using digital image correlation},
journal = {International Journal of Solids and Structures},
year = 2002,
volume = 39,
number = {13--14},
pages = {3777--3796},
month = {June-July},
}

@Article{mor02:mpi-app,
author = {H. Moritsch and S. Benkner},
title = {High-performance numerical pricing methods},
journal = {Concurrency and Computation-Practice \& Experience},
year = 2002,
volume = 14,
number = {8--9},
pages = {665--678},
month = {July-August},
}

@Article{deK02:mpi-app,
author = {J. de Kloe and A. van der Steen and H. Oksuzoglu and H. Dijkstra},
title = {A fully implicit parallel ocean model using {MUMPS}},
journal = {Journal of Supercomputing},
year = 2002,
volume = 23,
number = 2,
pages = {167--183},
month = SEP,
}


@Article{Oku:mpi-hpf-app,
author = {H. Okuda and N. Anan},
title = {Optimization of element-by-element {FEM} in {HPF} 1.1},
journal = {Concurrency and Computation-Practice \& Experience},
year = 2002,
volume = 14,
number = {8--9},
pages = {647--663},
month = {July-August},
}

@Article{eke02:mpi-app,
author = {T. Ekevid and N. E. Wiberg},
title = {A comparison of parallel implementation of explicit {DG} and central difference method},
journal = {Communications in Numerical Methods in Engineering},
year = 2002,
volume = 18,
number = 8,
pages = {585--597},
month = AUG,
}

@Article{LOlik2002,
author = "L. Oliker and X. Y. Li and P. Husbands and R. Biswas",
title = "Effects of ordering strategies and programming paradigms on sparse matrix computations",
journal = "SIAM Review",
volume = "44",
number = "3",
pages = "373--393",
month = SEP,
year = "2002",
}
@Article{SEMin2002,
author = "S. E. Minkoff",
title = "Spatial parallelism of a 3{D} finite difference velocity-stress elastic wave propagation code",
journal = "SIAM Journal on Scientific Computing",
volume = "24",
number = "1",
pages = "1--19",
month = AUG,
year = "2002",
}
@Article{JKlei2002,
author = "J. Kleinjung and N. Douglas and J. Heringa",
title = "Parallelized multiple alignment",
journal = "Bioinformatics",
volume = "18",
number = "9",
pages = "1270--1271",
month = SEP,
year = "2002",
}
@Article{AAfsa2002,
author = "A. Afsahi and N. J. Dimopoulos",
title = "Efficient communication using message prediction for clusters of multiprocessors",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "14",
number = "10",
pages = "859--883",
month = AUG,
year = "2002",
}
@Article{TBohl2002,
author = "T. Bohlen",
title = "Parallel 3-{D} viscoelastic finite difference seismic modelling",
journal = "Computers \& Geosciences",
volume = "28",
number = "8",
pages = "887--899",
month = OCT,
year = "2002",
}
@Article{GRLue2002,
author = "G. R. Luecke and Y. Zou and J. Coyle and J. Hoekstra and M. Kraeva",
title = "Deadlock detection in {MPI} programs",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "14",
number = "11",
pages = "911--932",
month = SEP,
year = "2002",
}
@Article{ARMRa2002,
author = "A. R. M. Rao",
title = "A parallel mixed time integration algorithm for nonlinear dynamic analysis",
journal = "Advances in Engineering Software",
volume = "33",
number = "5",
pages = "261--271",
month = MAY,
year = "2002",
}
@Article{PMieh2002,
author = "P. Miehe and A. Sandu and G. R. Carmichael and Y. H. Tang and D. Daescu",
title = "A communication library for the parallelization of air quality models on structured grids",
journal = "Atmospheric Environment",
volume = "36",
number = "24",
pages = "3917--3930",
month = AUG,
year = "2002",
}
@Article{YLian2002,
author = "Y. Li and S. M. Sze and T. S. Chao",
title = "A practical implementation of parallel dynamic load balancing for adaptive computing in {VLSI} device simulation",
journal = "Engineering with Computers",
volume = "18",
number = "2",
pages = "124--137",
month = "",
year = "2002",
}
@Article{WHLiu2002,
author = "W. H. Liu and C. L. Wang and V. K. Prasanna",
title = "Portable and scalable algorithm for irregular all-to-all communication",
journal = "Journal of Parallel and Distributed Computing",
volume = "62",
number = "10",
pages = "1493--1526",
month = OCT,
year = "2002",
}
@Article{CRDow2002,
author = "C. R. Dow and J. S. Chen and M. C. Hsieh",
title = "Checkpointing {MPI} applications on symmetric multi-processor machines using {SMPC}kpt",
journal = "Journal of Systems and Software",
volume = "63",
number = "2",
pages = "137--150",
month = AUG,
year = "2002",
}
@Article{GEFag2002,
author = "G. E. Fagg and J. J. Dongarra",
title = "H{ARNESS} fault tolerant {MPI} design, usage and performance issues",
journal = "Future Generation Computer Systems",
volume = "18",
number = "8",
pages = "1127--1142",
month = OCT,
year = "2002",
}
@Article{SBolu2002,
author = "S. Boluriaan and P. J. Morris",
title = "Two-dimensional simulations of wake vortex detection using radio acoustic sounding systems",
journal = "AIAA Journal",
volume = "40",
number = "11",
pages = "2247--2256",
month = NOV,
year = "2002",
}
@Article{KEkic2002,
author = "K. Ekici and A. S. Lyrintzis",
title = "Parallelization of rotorcraft aerodynamics {N}avier-{S}tokes codes",
journal = "AIAA Journal",
volume = "40",
number = "5",
pages = "887--896",
month = MAY,
year = "2002",
}
@Article{PHave2002,
author = "P. Have",
title = "Easy{MSG}: {T}ools and techniques for an adaptive overlapping in {SPMD} programming",
journal = "Esaim-Mathematical Modelling and Numerical Analysis-Modelisation Mathematique Et Analyse Numerique",
volume = "36",
number = "5",
pages = "863--882",
month = SEP-OCT,
year = "2002",
}
@Article{VESon2002,
author = "V. E. Sonzogni and A. M. Yommi and N. M. Nigro and M. A. Storti",
title = "A parallel finite element program on a {B}eowulf cluster",
journal = "Advances in Engineering Software",
volume = "33",
number = "7-10",
pages = "427--443",
month = JUL-OCT,
year = "2002",
}
@Article{GEise2002,
author = "G. Eisenhauer and F. E. Bustamante and K. Schwan",
title = "Native data representation: {A}n efficient wire format for high-performance distributed computing",
journal = "IEEE Transactions on Parallel and Distributed Systems",
volume = "13",
number = "12",
pages = "1234--1246",
month = DEC,
year = "2002",
}
@Article{MFeil2002,
author = "M. Feil and A. Uhl",
title = "Wavelet packet image decomposition on {MIMD} architectures",
journal = "Real-Time Imaging",
volume = "8",
number = "5",
pages = "399--412",
month = OCT,
year = "2002",
}
@Article{MSala2002,
author = "M. Sala",
title = "An algebraic 2-level domain decomposition preconditioner with applications to the compressible {E}uler equations",
journal = "International Journal for Numerical Methods in Fluids",
volume = "40",
number = "12",
pages = "1551--1560",
month = DEC,
year = "2002",
}
@Article{SBenk2003,
author = "S. Benkner and V. Sipkova",
title = "Exploiting distributed-memory and shared-memory parallelism on clusters of {SMP}s with data parallel programs",
journal = "International Journal of Parallel Programming",
volume = "31",
number = "1",
pages = "3--19",
month = FEB,
year = "2003",
}
@Article{MSMul2002,
author = "M. S. Muller and E. Gabriel and M. M. Resch",
title = "A software development environment for {G}rid computing",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "14",
number = "13-15",
pages = "1543--1551",
month = NOV-DEC,
year = "2002",
}
@Article{GMahi2002,
author = "G. Mahinthakumar and F. Saied",
title = "A hybrid {MPI}-{O}pen{MP} implementation of an implicit finite-element code on parallel architectures",
journal = "International Journal of High Performance Computing Applications",
volume = "16",
number = "4",
pages = "371--393",
month = WIN,
year = "2002",
}
@Article{DJMav2002,
author = "D. J. Mavriplis",
title = "Parallel performance investigations of an unstructured mesh {N}avier-{S}tokes solver",
journal = "International Journal of High Performance Computing Applications",
volume = "16",
number = "4",
pages = "395--407",
month = WIN,
year = "2002",
}
@Article{IAhma2003,
author = "I. Ahmad",
title = "H{ARD}: {A} hypercube embedding algorithm for state assignment of finite state machines",
journal = "Computers \& Electrical Engineering",
volume = "29",
number = "2",
pages = "327--356",
month = MAR,
year = "2003",
}
@Article{AJGar2003,
author = "A. J. Garcia-Loureiro and J. M. Lopez-Gonzalez and T. F. Pena",
title = "A parallel 3{D} semiconductor device simulator for gradual heterojunction bipolar transistors",
journal = "International Journal of Numerical Modelling-Electronic Networks Devices and Fields",
volume = "16",
number = "1",
pages = "53--66",
month = JAN-FEB,
year = "2003",
}
@Article{HZSha2003,
author = "H. Z. Shan and J. P. Singh and L. Oliker and R. Biswas",
title = "Message passing and shared address space parallelism on an {SMP} cluster",
journal = "Parallel Computing",
volume = "29",
number = "2",
pages = "167--186",
month = FEB,
year = "2003",
}
@Article{DBLei2003,
author = "D. B. Leineweber and A. Schafer and H. G. Bock and J. P. Schloder",
title = "An efficient multiple shooting based reduced {SQP} strategy for large-scale dynamic process optimization - {P}art {II}: {S}oftware aspects and applications",
journal = "Computers \& Chemical Engineering",
volume = "27",
number = "2",
pages = "167--174",
month = FEB,
year = "2003",
}
@Article{GLeuc2003,
author = "G. Leucke and H. Chen and J. Coyle and J. Hoekstra and M. Kraeva and Y. Zou",
title = "M{PI}-{CHECK}: a tool for checking {F}ortran 90 {MPI} programs",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "15",
number = "2",
pages = "93--100",
month = FEB,
year = "2003",
}
@Article{ILirk2003,
author = "I. Lirkov",
title = "M{PI} solver for 3{D} elasticity problems",
journal = "Mathematics and Computers in Simulation",
volume = "61",
number = "3-6",
pages = "509--516",
month = JAN,
year = "2003",
}
@Article{MGole2003,
author = "M. Golebiewski and H. Ritzdorf and J. L. Traff and F. Zimmermann",
title = "The {MPI}/{SX} implementation of {MPI} for {NEC}'s {SX}-6 and other {NEC} platforms",
journal = "NEC Research \& Development",
volume = "44",
number = "1",
pages = "69--74",
month = JAN,
year = "2003",
}
@Article{HUeha2003,
author = "H. Uehara and M. Tamura and M. Yokokawa",
title = "M{PI} performance measurement on the earth simulator",
journal = "NEC Research \& Development",
volume = "44",
number = "1",
pages = "75--79",
month = JAN,
year = "2003",
}
@Article{WOhfu2003,
author = "W. Ohfuchi and S. Shingu and H. Fuchigami and M. Yamada",
title = "Dependence of the parallel performance of the atmospheric general circulation model for the earth simulator on problem size",
journal = "NEC Research \& Development",
volume = "44",
number = "1",
pages = "99--103",
month = JAN,
year = "2003",
}
@Article{PBode2003,
author = "P. Bode and J. P. Ostriker",
title = "Tree particle-mesh: {A}n adaptive, efficient, and parallel code for collisionless cosmological simulation",
journal = "Astrophysical Journal Supplement Series",
volume = "145",
number = "1",
pages = "1--13",
month = MAR,
year = "2003",
}
@Article{JPSch2003,
author = "J. P. Schulze and U. Lang",
title = "The parallelized perspective shear-warp algorithm for volume rendering",
journal = "Parallel Computing",
volume = "29",
number = "3",
pages = "339--354",
month = MAR,
year = "2003",
}
@Article{LChen2003,
author = "L. Chen and I. Fujishiro and K. Nakajima",
title = "Optimizing parallel performance of unstructured volume rendering for the {E}arth {S}imulator",
journal = "Parallel Computing",
volume = "29",
number = "3",
pages = "355--371",
month = MAR,
year = "2003",
}
@Article{EAJoh2003,
author = "E. A. Johnson and C. Proppe and B. F. Spencer and L. A. Bergman and G. S. Szekely and Schueller",
title = "Parallel processing in computational stochastic dynamics",
journal = "Probabilistic Engineering Mechanics",
volume = "18",
number = "1",
pages = "37--60",
month = JAN,
year = "2003",
}
@Article{ANeli2003,
author = "A. Nelisse and J. Maassen and T. Kielmann and H. E. Bal",
title = "C{CJ}: object-base message passing and collective communication in {J}ava",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "15",
number = "3-5",
pages = "341--369",
month = MAR-APR,
year = "2003",
}
@Article{LTang2003,
author = "L. Tang and R. E. Bartels and P. C. Chen and D. D. Liu",
title = "Numerical investigation of transonic limit cycle oscillations of a two-dimensional supercritical wing",
journal = "Journal of Fluids and Structures",
volume = "17",
number = "1",
pages = "29--41",
month = JAN,
year = "2003",
}

@Article{JHGuo2003,
author = "J. H. Guo and T. R. Taha",
title = "Parallel implementation of the split-step and the pseudospectral methods for solving higher {K}d{V} equation",
journal = "Mathematics and Computers in Simulation",
volume = "62",
number = "1-2",
pages = "41--51",
month = FEB,
year = "2003",
}

@Article{DBore2003,
author = "D. Borello and A. Corsini and F. Rispoli",
title = "A finite element overlapping scheme for turbomachinery flows on parallel platforms",
journal = "Computers \& Fluids",
volume = "32",
number = "7",
pages = "1017--1047",
month = AUG,
year = "2003",
}
@Article{TRabc2003,
author = "T. Rabczuk and J. Eibl",
title = "Simulation of high velocity concrete fragmentation using {SPH}/{MLSPH}",
journal = "International Journal for Numerical Methods in Engineering",
volume = "56",
number = "10",
pages = "1421--1444",
month = MAR,
year = "2003",
}
@Article{ACris2003,
author = "A. Cristobal-Salas and A. Tchernykh and J. L. Gaudiot and W. Y. Lin",
title = "Non-strict execution in parallel and distributed computing",
journal = "International Journal of Parallel Programming",
volume = "31",
number = "2",
pages = "77--105",
month = APR,
year = "2003",
}
@Article{VNAle2003,
author = "V. N. Alexandrov and I. T. Dimov and A. Karaivanova and C. J. K. Tan",
title = "Parallel {M}onte {C}arlo algorithms for information retrieval",
journal = "Mathematics and Computers in Simulation",
volume = "62",
number = "3-6",
pages = "289--295",
month = MAR,
year = "2003",
}
@Article{YMLia2003,
author = "Y. M. Li and H. M. Lu and T. W. Tang and S. M. Sze",
title = "A novel parallel adaptive {M}onte {C}arlo method for nonlinear {P}oisson equationin semiconductor devices",
journal = "Mathematics and Computers in Simulation",
volume = "62",
number = "3-6",
pages = "413--420",
month = MAR,
year = "2003",
}
@Article{SCast2003,
author = "S. Castellaro and F. Mulargia",
title = "Implementing cellular automata models for earthquakes on parallel computers- art. no. 1204",
journal = "Geophysical Research Letters",
volume = "30",
number = "5",
pages = "1204--1204",
month = MAR,
year = "2003",
}
@Article{RBrig2003,
author = "R. Brightwell and R. Riesen and A. B. Maccabe",
title = "Design, implementation, and performance of {MPI} on {P}ortals 3.0",
journal = "International Journal of High Performance Computing Applications",
volume = "17",
number = "1",
pages = "7--20",
month = SPR,
year = "2003",
}
@Article{FGarc2003,
author = "F. Garcia-Carballeira and A. Calderon and J. Carretero and J. Fernandez and J. M. Perez",
title = "The design of the expand parallel file system",
journal = "International Journal of High Performance Computing Applications",
volume = "17",
number = "1",
pages = "21--37",
month = SPR,
year = "2003",
}
@Article{RRabe2003,
author = "R. Rabenseifner and G. Wellein",
title = "Communication and optimization aspects of parallel programming models on hybrid architectures",
journal = "International Journal of High Performance Computing Applications",
volume = "17",
number = "1",
pages = "49--62",
month = SPR,
year = "2003",
}
@Article{SLafl2003,
author = "S. Laflamme and J. Dompierre and F. Guibault and R. Roy",
title = "Applying parmetis to structured remeshing for industrial {CFD} applications",
journal = "International Journal of High Performance Computing Applications",
volume = "17",
number = "1",
pages = "63--76",
month = SPR,
year = "2003",
}
@Article{MPern2003,
author = "M. Pernpointner and L. Visscher",
title = "Parallelization of four-component calculations. {II}. {S}ymmetry-driven parallelization of the 4-spinor {CCSD} algorithm",
journal = "Journal of Computational Chemistry",
volume = "24",
number = "6",
pages = "754--759",
month = APR,
year = "2003",
}
@Article{YPana2003,
author = "Y. Pan and J. J. S. Shang and M. Guo",
title = "A scalable {HPF} implementation of a finite-volume computational electromagnetics application on a {CRAY} {T}3{E} parallel systemt",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "15",
number = "6",
pages = "607--621",
month = MAY,
year = "2003",
}
@Article{FIsai2003,
author = "F. Isaila and W. F. Tichy",
title = "Clusterfile: a flexible physical layout parallel file system",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "15",
number = "7-8",
pages = "653--679",
month = JUN-JUL,
year = "2003",
}
@Article{FYuas2003,
author = "F. Yuasa and K. Tobimatsu and S. Kawabata",
title = "Parallelization of the multidimensional integration package: {DICE}",
journal = "Nuclear Instruments \& Methods in Physics Research Section A-Accelerators Spectrometers Detectors and Associated Equipment",
volume = "502",
number = "2-3",
pages = "599--601",
month = APR,
year = "2003",
}

@Article{SCDon2003,
author = "S. C. Dong and G. E. Karniadakis",
title = "P-refinement and {P}-threads",
journal = "Computer Methods in Applied Mechanics and Engineering",
volume = "192",
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pages = "2191--2201",
month = "",
year = "2003",
}
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author = "K. Ekici and A. S. Lyrintzis",
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author = "P. Amico and L. Bosi and C. Cattuto and L. Gammaitoni and F. Marchesoni and Punturo",
title = "A parallel {B}eowulf-based system for the detection of gravitational waves in interferometric detectors",
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volume = "153",
number = "2",
pages = "179--189",
month = JUN,
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author = "S. W. Gao",
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volume = "153",
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pages = "190--198",
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@Article{VBlan2003,
author = "V. Blanco and P. Gonzalez and J. C. Cabaleiro and D. B. Heras and T. F. Pena and Pombo",
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number = "5",
pages = "721--733",
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@Article{RHReu2003,
author = "R. H. Reussner",
title = "Using {SK}a{MPI} for developing high-performance {MPI} programs with performance portability",
journal = "Future Generation Computer Systems",
volume = "19",
number = "5",
pages = "749--759",
month = JUL,
year = "2003",
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author = "D. Lazzaro",
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author = "D. Shires and R. Mohan",
title = "Optimization and performance of a {F}ortran 90 {MPI}-based unstructured code onlarge-scale parallel systems",
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volume = "25",
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author = "P. A. Farrell and H. Ong",
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@Article{ARubi2003,
author = "A. Rubinstein and F. Rachidi and M. Rubinstein and B. Reusser",
title = "A parallel implementation of {NEC} for the analysis of large structures",
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volume = "45",
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pages = "177--188",
month = MAY,
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author = "J. C. No and R. Thakur and A. Choudhary",
title = "High-performance scientific data management system",
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author = "P. Lin and Q. P. Guo and X. Q. Chen",
title = "A fully explicit method for incompressible flow computation",
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month = "",
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author = "S. D. Shellman and J. P. Lewis and K. R. Glaesemann and K. Sikorski and G. A. Voth",
title = "Massively parallel linear-scaling algorithm in an ab initio local-orbital total-energy method",
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pages = "1--15",
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author = "N. T. Karonis and B. Toonen and I. Foster",
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author = "R. L. Graham and S. E. Choi and D. J. Daniel and N. N. Desai and R. G. Minnich and Rasmussen",
title = "A network-failure-tolerant message-passing system for terascale clusters",
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month = AUG,
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author = "J. Lohout and A. D. George",
title = "A high-performance communication service for parallel computing on distributed {DSP} systems",
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volume = "29",
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@Article{XYZhu2003,
author = "X. Y. Zhu and L. Carin and T. Dogaru",
title = "Parallel implementation of the biorthogonal multiresolution time-domain method",
journal = "Journal of the Optical Society of America A-Optics Image Science and Vision",
volume = "20",
number = "5",
pages = "844--855",
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year = "2003",
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author = "P. R. Amestoy and I. S. Duff and J. Y. L'Excellent and X. Y. S. Li",
title = "Impact of the implementation of {MPI} point-to-point communications on the performance of two general sparse solvers",
journal = "Parallel Computing",
volume = "29",
number = "7",
pages = "833--849",
month = JUL,
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author = "W. S. Zhang and G. Q. Zhang",
title = "Factorization synthesized-shot prestack depth migration in the helical coordinate system",
journal = "Chinese Journal of Geophysics-Chinese Edition",
volume = "46",
number = "4",
pages = "520--525",
month = JUL,
year = "2003",
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author = "G. R. Luecke and M. Kraeva and L. L. Ju",
title = "Comparing the performance of {MPICH} with {C}ray's {MPI} and with {SGI}'s {MPI}",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "15",
number = "9",
pages = "779--802",
month = AUG,
year = "2003",
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@Article{JHKri2003,
author = "J. H. Kristensen and I. Farnan",
title = "Efficient solid state {NMR} powder simulations using {SMP} and {MPP} parallel computation",
journal = "Journal of Magnetic Resonance",
volume = "161",
number = "2",
pages = "183--190",
month = APR,
year = "2003",
}
@Article{NTKar2003b,
author = "N. T. Karonis and M. E. Papka and J. Binns and J. Bresnahan and J. A. Insley and D. Jones and Link",
title = "High-resolution remote rendering of large datasets in a collaborative environment",
journal = "Future Generation Computer Systems",
volume = "19",
number = "6",
pages = "909--917",
month = AUG,
year = "2003",
}
@Article{RVald2003,
author = "R. Valdarnini",
title = "Parallelization of a treecode",
journal = "New Astronomy",
volume = "8",
number = "7",
pages = "691--710",
month = SEP,
year = "2003",
}
@Article{THeya2003,
author = "T. Hey and A. Trefethen",
title = "e-science and its implications",
journal = "Philosophical Transactions of the Royal Society of London Series A-Mathematical Physical and Engineering Sciences",
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number = "1809",
pages = "1809--1825",
month = AUG,
year = "2003",
}
@Article{FRonq2003,
author = "F. Ronquist and J. P. Huelsenbeck",
title = "Mr{B}ayes 3: {B}ayesian phylogenetic inference under mixed models",
journal = "Bioinformatics",
volume = "19",
number = "12",
pages = "1572--1574",
month = AUG,
year = "2003",
}

@Article{KBLi2003,
author = "K. B. Li",
title = "Clustal{W}-{MPI}: {C}lustal{W} analysis using distributed and parallel computing",
journal = "Bioinformatics",
volume = "19",
number = "12",
pages = "1585--1586",
month = AUG,
year = "2003",
}
@Article{SGoed2003,
author = "S. Goedecker and M. Boulet and T. Deutsch",
title = "An efficient 3-dim {FFT} for plane wave electronic structure calculations on massively parallel machines composed of multiprocessor nodes",
journal = "Computer Physics Communications",
volume = "154",
number = "2",
pages = "105--110",
month = AUG,
year = "2003",
}
@Article{BGLar2003,
author = "B. G. Larwood and N. P. Weatherill and O. Hassan and K. Morgan",
title = "Domain decomposition approach for parallel unstructured mesh generation",
journal = "International Journal for Numerical Methods in Engineering",
volume = "58",
number = "2",
pages = "177--188",
month = SEP,
year = "2003",
}
@Article{RGJia2004,
author = "R. G. Jia and B. Sunden",
title = "Parallelization of a multi-blocked {CFD} code via three strategies for fluid flow and heat transfer analysis",
journal = "Computers \& Fluids",
volume = "33",
number = "1",
pages = "57--80",
month = JAN,
year = "2004",
}
@Article{HLTru2003,
author = "H. L. Truong and T. Fahringer",
title = "S{CALEA}: a performance analysis tool for parallel programs",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "15",
number = "11-12",
pages = "1001--1025",
month = SEP,
year = "2003",
}
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author = "M. Langlais and G. Latu and J. Roman and P. Silan",
title = "Performance analysis and qualitative results of an efficient parallel stochastic simulator for a marine host-parasite system",
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volume = "15",
number = "11-12",
pages = "1133--1150",
month = SEP,
year = "2003",
}
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author = "P. D. Michailidis and K. G. Margaritis",
title = "Performance evaluation of load balancing strategies for approximate string matching application on an {MPI} cluster of heterogeneous workstations",
journal = "Future Generation Computer Systems",
volume = "19",
number = "7",
pages = "1075--1104",
month = OCT,
year = "2003",
}
@Article{MGove2003,
author = "M. Govett and L. Hart and T. Henderson and J. Middlecoff and D. Schaffer",
title = "The {S}calable {M}odeling {S}ystem: directive-based code parallelization for distributed and shared memory computers",
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volume = "29",
number = "8",
pages = "995--1020",
month = AUG,
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author = "M. Yamashita and K. Fujisawa and M. Kojima",
title = "S{DPARA}: {S}emi{D}efinite {P}rogramming {A}lgorithm pa{RA}llel version",
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volume = "29",
number = "8",
pages = "1053--1067",
month = AUG,
year = "2003",
}
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author = "N. Sakai and N. Hata and H. Liao and T. Dohi",
title = "High performance computing for parallel rendering in surgical auto stereoscopic display and navigation",
journal = "Cars 2003: Computer Assisted Radiology and Surgery",
volume = "2003",
number = "1256",
pages = "403--407",
OPTnote = "Proceedings",
year = "",
}
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title = "Parallel algorithms for {B}ayesian phylogenetic inference",
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number = "7-8",
pages = "707--718",
month = JUL-AUG,
year = "2003",
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author = "C. Ferrari and C. Guerra and G. Zanotti",
title = "A grid-aware approach to protein structure comparison",
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pages = "728--737",
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year = "2003",
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author = "Y. Huang and H. G. Sung and S. Y. Hsieh and V. G. Yang",
title = "Large-eddy simulation of combustion dynamics of lean-premixed swirl-stabilized combustor",
journal = "Journal of Propulsion and Power",
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pages = "67--84",
month = "",
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pages = "615--630",
month = OCT,
year = "2003",
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pages = "1153--1174",
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author = "I. Hidajat and M. Singh and K. K. Mohanty",
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pages = "1661--1680",
month = DEC,
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author = "H. Habata and M. Yokokawa and S. Kitawaki",
title = "The development of the {E}arth {S}imulator",
journal = "Ieice Transactions on Information and Systems",
volume = "E86D",
number = "10",
pages = "1947--1954",
month = OCT,
year = "2003",
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author = "A. T. Chronopoulos and D. Grosu and A. M. Wissink and M. Benche and J. Y. Liu",
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author = "J. S. Vetter and F. Mueller",
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author = "M. Bernaschi and G. Iannello and M. Lauria",
title = "Efficient implementation of reduce-scatter in {MPI}",
journal = "Journal of Systems Architecture",
volume = "49",
number = "3",
pages = "89--108",
month = AUG,
year = "2003",
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@Article{FJSei2003,
author = "F. J. Seinstra and D. Koelma",
title = "Incorporating memory layout in the modeling of message passing programs",
journal = "Journal of Systems Architecture",
volume = "49",
number = "3",
pages = "109--121",
month = AUG,
year = "2003",
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@Article{LWLia2003,
author = "L. W. Li and Y. J. Wang and E. P. Li",
title = "M{PI}-based parallelized precorrected {FFT} algorithm for analyzing scattering by arbitrarily shaped three-dimensional objects - {A}bstract",
journal = "Journal of Electromagnetic Waves and Applications",
volume = "17",
number = "10",
pages = "1489--1491",
month = "",
year = "2003",
}
Parallel unsteady incompressible viscous flow computations using an
unstructured multigrid method
Tai, CH, JOURNAL OF COMPUTATIONAL PHYSICS, NOV 20 2003, 192, 1, pp.
277-311.

Tai, CH;Zhao, Y

Nanyang Technol Univ/Singapore/Singapore/639798
ANL libraries: 203

Abstract:
The development and validation of a parallel unstructured
non-nested multigrid method for simulation of unsteady
incompressible viscous flow is presented. The Navier-Stokes
solver is based on the artificial compressibility approach and a
higher-order characteristics-based finite-volume scheme on an
unstructured multigrid. Unsteady flow is calculated with an
implicit dual time-stepping scheme. The parallelization of the
solver is achieved by multigrid domain decomposition approach
(MG-DD), using the single program multiple data (SPMD)
programming paradigm and message-passing interface (MPI)
forcommunication of data. The parallel codes using single grid
and multigrid are used to simulate steady and unsteady
incompressible viscous flows over a circular cylinder for
validation and performance evaluation purposes. Thespeedups and
parallel efficiencies obtained by both the parallel single grid
and multigrid solvers are reasonably good for both test cases,
using up to 32 processors on the SGI Origin 2000. A maximum
speedup of 12 could be achieved on 16 processors for
high-Reynolds number unsteady viscous flow. The parallel results
obtained were compared with those using serial single grid and
multigrid codes and it remains the same as those obtained by
serial solvers and agrees well with numerical solutions obtained
by other researchers as well as experimental measurements.

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volume = "38",
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pages = "84--94",
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year = "2003",
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author = "A. Karwande and X. Yuan and D. K. Lowenthal",
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volume = "38",
number = "10",
pages = "95--106",
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author = "L. W. Li and Y. J. Wang and E. P. Li",
title = "M{PI}-based parallelized precorrected {FFT} algorithm for analyzing scattering by arbitrarily shaped three-dimensional objects",
journal = "Electromagnetic Waves",
year = "2003",
volume = "42",
pages = "247--259",
}
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year = "2004",
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number = "2",
pages = "111--126",
month = FEB,
year = "2004",
}
@Article{SGorl2004,
author = "S. Gorlatch",
title = "Send-receive considered harmful: {M}yths and realities of message passing",
journal = "ACM Transactions on Programming Languages and Systems",
volume = "26",
number = "1",
pages = "47--56",
month = JAN,
year = "2004",
}
@Article{CWKes2004,
author = "C. W. Kessler",
title = "Managing distributed shared arrays in a bulk-synchronous parallel programming environment",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "2-3",
pages = "133--153",
month = FEB-MAR,
year = "2004",
}
@Article{SBenk2004,
author = "S. Benkner and T. Brandes",
title = "Compiling data-parallel programs for clusters of {SMP}s",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "2-3",
pages = "111--132",
month = FEB-MAR,
year = "2004",
}
@Article{TRaub2004,
author = "T. Rauber and R. Reilein and G. Runger",
title = "Group-{SPMD} programming with orthogonal processor groups",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "2-3",
pages = "173--195",
month = FEB-MAR,
year = "2004",
}
@Article{DJQui2004,
author = "D. J. Quinlan and M. Schordan and B. Miller and M. Kowarschik",
title = "Parallel object-oriented framework optimization",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "2-3",
pages = "293--302",
month = FEB-MAR,
year = "2004",
}
@Article{PRao2004,
author = "P. Rao",
title = "A parallel hydrodynamic model for shallow water equations",
journal = "Applied Mathematics and Computation",
volume = "150",
number = "1",
pages = "291--302",
month = FEB,
year = "2004",
}

@Article{PFLiu2003,
author = "P. F. Liu and K. Li",
title = "Performance analysis of a {BiCGSTAB} solver for multiple-marine-propeller simulation with several {MPI} libraries and platforms",
journal = "High Performance Scientific and Engineering Computing: Hardware/Software Support",
volume = "750",
number = "",
pages = "63--78",
month = "",
year = "2003",
}

@Article{AJian2004,
author = "A. Jiang and S. Y. Shi and G. Jin and D. W. Prather",
title = "Performance analysis of three dimensional high index contrast dielectric waveguides",
journal = "Optics Express",
volume = "12",
number = "4",
pages = "633--643",
month = FEB,
year = "2004",
}
@Article{GAlte2004,
author = "G. Altekar and S. Dwarkadas and J. P. Huelsenbeck and F. Ronquist",
title = "Parallel metropolis coupled {M}arkov chain {M}onte {C}arlo for {B}ayesian phylogenetic inference",
journal = "Bioinformatics",
volume = "20",
number = "3",
pages = "407--415",
month = FEB,
year = "2004",
}
@Article{AQCui2004,
author = "A. Q. Cui and R. L. Street",
title = "Large-eddy simulation of coastal upwelling flow",
journal = "Environmental Fluid Mechanics",
volume = "4",
number = "2",
pages = "197--223",
month = JUN,
year = "2004",
}
@Article{BKalu2004,
author = "B. Kaludercic",
title = "Parallelisation of the {L}agrangian model in a mixed {E}ulerian-{L}agrangian {CFD} algorithm",
journal = "Journal of Parallel and Distributed Computing",
volume = "64",
number = "2",
pages = "277--284",
month = FEB,
year = "2004",
}
@Article{ACBur2004,
author = "A. C. Burt and I. B. Celik and R. S. Gemmen and A. V. Smirnov",
title = "A numerical study of cell-to-cell variations in a {SOFC} stack",
journal = "Journal of Power Sources",
volume = "126",
number = "1-2",
pages = "76--87",
month = FEB,
year = "2004",
}
@Article{SCDon2004,
author = "S. C. Dong and G. E. Karniadakis",
title = "Dual-level parallelism for high-order {CFD} methods",
journal = "Parallel Computing",
volume = "30",
number = "1",
pages = "1--20",
month = JAN,
year = "2004",
}
@Article{AVGer2004,
author = "A. V. Gerbessiotis",
title = "Architecture independent parallel binomial tree option price valuations",
journal = "Parallel Computing",
volume = "30",
number = "2",
pages = "301--316",
month = FEB,
year = "2004",
}
@Article{VBlan2004,
author = "V. Blanco and P. Gonzalez and J. C. Cabaleiro and D. B. Heras and T. F. Pena and Pombo",
title = "Performance prediction for parallel iterative solvers",
journal = "Journal of Supercomputing",
volume = "28",
number = "2",
pages = "177--191",
month = MAY,
year = "2004",
}

@Article{SSVad2004,
author = "S. S. Vadhiyar and G. E. Fagg and J. J. Dongarra",
title = "Towards an accurate model for collective communications",
journal = "International Journal of High Performance Computing Applications",
volume = "18",
number = "1",
pages = "159--167",
month = SPR,
year = "2004",
}

@Article{PAmic2004,
author = "P. Amico and L. Bosi and C. Cattuto and L. Gammaitoni and M. Punturo and Travasso",
title = "A computational test facility for distributed analysis of gravitational wave signals",
journal = "Classical and Quantum Gravity",
volume = "21",
number = "5",
pages = "S847-S851",
month = MAR,
year = "2004",
}

@Article{FAcer2004,
author = "F. Acernese and F. Barone and R. De Rosa and A. Eleuteri and L. Milano and Pardi",
title = "A multi-standard farm prototype for gravitational wave signal analysis",
journal = "Classical and Quantum Gravity",
volume = "21",
number = "5",
pages = "S837-S842",
month = MAR,
year = "2004",
}

@Article{STomo2004,
author = "S. Tomov and R. Bennett and M. McGuigan and A. Peskin and G. Smith and J. Spiletic",
title = "Application of interactive parallel visualization for commodity-based clusters using visualization {API}s",
journal = "Computers \& Graphics-Uk",
volume = "28",
number = "2",
pages = "273--278",
month = APR,
year = "2004",
}
@Article{ARMRa2004,
author = "A. R. M. Rao and T. V. S. R. A. Rao and B. Dattaguru",
title = "Comparative efficiencies of three parallel algorithms for nonlinear implicit transient dynamic analysis",
journal = "Sadhana-Academy Proceedings in Engineering Sciences",
volume = "29",
number = "pt. 1",
pages = "57--81",
month = FEB,
year = "2004",
}



@Article{VChau2004,
author = "V. Chaudhary and W. L. Hase and H. Jiang and L. Sun and D. Thaker",
title = "Experiments with parallelizing tribology simulations",
journal = "Journal of Supercomputing",
volume = "28",
number = "3",
pages = "323--343",
month = JUN,
year = "2004",
}
@Article{MMuri2004,
author = "M. Murillo and X. C. Cai",
title = "A fully implicit parallel algorithm for simulating the non-linear electrical activity of the heart",
journal = "Numerical Linear Algebra with Applications",
volume = "11",
number = "2-3",
pages = "261--277",
month = MAR-APR,
year = "2004",
}
@Article{EPLia2004,
author = "E. P. Li and H. F. Jin and S. Wang and L. W. Li",
title = "Signal propagation in high speed differential transmission line using parallelized finite-difference time-domain method",
journal = "Journal of Electromagnetic Waves and Applications",
volume = "18",
number = "4",
pages = "437--454",
month = "",
year = "2004",
}

@InProceedings{shir99:mpi-analysis,
author = {Dale Shires and Lori Pollock and Sara Sprenkle},
title = {Program Flow Graph Construction for Static Analysis of {MPI} Programs},
booktitle = {Proceedings of the conference on Parallel and Distributed Processing Techniques and Applications},
pages = {1847-1853},
year = 1999,
month = JUN,
}

@TechReport{sie03:mpi-analysis,
author = {Stephen F. Siegel and George Avrunin},
title = {Analysis of MPI Programs},
institution = {Department of Computer Science, University of Massachusetts Amherst},
year = 2003,
number = {UM-CS-2003-036},
}

@InProceedings{Stellner96,
author = "G. Stellner",
title = "CoCheck: Checkpointing and Process Migration for {MPI}",
booktitle = "Proc. 10th Int. Parallel Processing Symp. (IPPS'96) CD-ROM",
publisher = "IEEE",
address = "Honolulu, HA",
month = apr,
year = "1996",
keywords = "Synchronization, Virtual Memory, and Runtime System,",
}

@InProceedings{bon03:mpi-other,
author = {Dan Bonachea and Jason Duell},
title = {Problems with using {MPI} 1.1 and 2.0 as compilation targets for parallel language implementations},
booktitle = {2nd Workshop on Hardware/Software Support for High Performance Scientific and Engineering Computing, SHPSEC-PACT03},
year = 2003,
note = {Also to appear in the International Journal on High Performance Computing and Networking (IJHPCN)}
}

@Article{DStan2004,
author = "D. Stanescu and D. Ait-Ali-Yahia and W. G. Habashi and M. P. Robichaud",
title = "Spectral element method for linear fan tone noise radiation",
journal = "AIAA Journal",
volume = "42",
number = "4",
pages = "696--705",
month = APR,
year = "2004",
}

@Article{DIron2004,
author = "D. Irony and G. Shklarski and S. Toledo",
title = "Parallel and fully recursive multifrontal sparse {C}holesky",
journal = "Future Generation Computer Systems",
volume = "20",
number = "3",
pages = "425--440",
month = APR,
year = "2004",
}

@Article{FGarc2004,
author = "F. Garcia-Carballeira and J. Carretero and A. Calderon and J. M. Perez and J. D. Garcia",
title = "An adaptive cache coherence protocol specification for parallel input/output systems",
journal = "IEEE Transactions on Parallel and Distributed Systems",
volume = "15",
number = "6",
pages = "533--545",
month = JUN,
year = "2004",
}

@Article{CBoer2004,
author = "C. Boeres and V. E. F. Rebello",
title = "Easy{G}rid: towards a framework for the automatic {G}rid enabling of legacy {MPI}applications",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "5",
pages = "425--432",
month = APR,
year = "2004",
}

@Article{BButr2004,
author = "B. Butrylo and C. Vollaire and L. Nicolas and A. Nicolas",
title = "Numerical performance of the distributed vector finite-element time-domain algorithm",
journal = "IEEE Transactions on Magnetics",
volume = "40",
number = "2",
pages = "997--1000",
month = MAR,
year = "2004",
}

@Article{THana2004,
author = "T. Hanawa and S. Ikuno and A. Kamitani",
title = "Application of parallelized multigrid method to solution of {MHD} equilibrium with {MPI}",
journal = "IEEE Transactions on Magnetics",
volume = "40",
number = "2",
pages = "1005--1008",
month = MAR,
year = "2004",
}

@Article{KTagu2004,
author = "K. Taguchi and M. Uchiya and T. Kashiwa and K. Hirayama and H. Kuribayashi and S. Komatsu",
title = "F{DTD} large-scale parallel supercomputing and its application to the analysis of radiation characteristics of an antenna mounted on a vehicle",
journal = "International Journal of Rf and Microwave Computer-Aided Engineering",
volume = "14",
number = "3",
pages = "253--261",
month = MAY,
year = "2004",
}

@Article{YMizu2004,
author = "Y. Mizutani and F. Ino and K. Hagihara",
title = "Evaluation of performance prediction method for master/slave parallel programs",
journal = "Ieice Transactions on Information and Systems",
volume = "E87D",
number = "4",
pages = "967--975",
month = APR,
year = "2004",
}

@Article{JMOrd2004,
author = "J. M. Orduna and F. Silla and J. Duato",
title = "On the development of a communication-aware task mapping technique",
journal = "Journal of Systems Architecture",
volume = "50",
number = "4",
pages = "207--220",
month = MAR,
year = "2004",
}

@Article{YKSuh2004,
author = "Y. K. Suh and J. H. Park and S. K. Kim and Y. R. Son",
title = "Study on the periodic flows in a rectangular container under a background rotation",
journal = "Ksme International Journal",
volume = "18",
number = "4",
pages = "671--680",
month = APR,
year = "2004",
}

@Article{MYHaa2004,
author = "M. Y. Ha and J. G. Kim",
title = "Numerical simulation of natural convection in annuli with internal fins",
journal = "Ksme International Journal",
volume = "18",
number = "4",
pages = "718--730",
month = APR,
year = "2004",
}

@Article{JEbed2004,
author = "J. Ebedes and A. Datta",
title = "Multiple sequence alignment in parallel on a workstation cluster",
journal = "Bioinformatics",
volume = "20",
number = "7",
pages = "1193--1195",
month = MAY,
year = "2004",
}

@Article{FVThe2004,
author = "F. V. Theos and I. E. Lagaris and D. G. Papageorgiou",
title = "P{ANMIN}: sequential and parallel global optimization procedures with a variety of options for the local search strategy",
journal = "Computer Physics Communications",
volume = "159",
number = "1",
pages = "63--69",
month = MAY,
year = "2004",
}

@Article{JPein2004,
author = "J. Peinado and A. M. Vidal",
title = "A parallel {B}royden approach to the {T}oeplitz inverse eigenproblem",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "6",
pages = "587--610",
month = MAY,
year = "2004",
}

@Article{MCole2004,
author = "M. Cole",
title = "Bringing skeletons out of the closet: a pragmatic manifesto for skeletal parallel programming",
journal = "Parallel Computing",
volume = "30",
number = "3",
pages = "389--406",
month = MAR,
year = "2004",
}

@Article{BButr2004,
author = "B. Butrylo and F. Musy and L. Nicolas and R. Perrussel and R. Scorretti and C. Vollaire",
title = "A survey of parallel solvers for the finite element method in computational electromagnetics",
journal = "Compel-the International Journal for Computation and Mathematics in Electrical and Electronic Engineering",
volume = "23",
number = "2",
pages = "531--546",
month = "",
year = "2004",
}
@Article{SCaho2004,
author = "S. Cahon and N. Melab and E. G. Talbi",
title = "{ParadisEO}: {A} framework for the reusable design of parallel and distributed metaheuristics",
journal = "Journal of Heuristics",
volume = "10",
number = "3",
pages = "357--380",
month = MAY,
year = "2004",
}

@Article{YJWan2004,
author = "Y. J. Wang and X. C. Nie and L. W. Li and E. P. Li",
title = "A parallel analysis of the scattering from inhomogeneous dielectric bodies by the volume integral equation and the precorrected-{FFT} algorithm",
journal = "Microwave and Optical Technology Letters",
volume = "42",
number = "1",
pages = "77--79",
month = JUL,
year = "2004",
}

@Article{UTrem2004,
author = "U. Tremel and F. Deister and O. Hassan and N. P. Weatherill",
title = "Automatic unstructured surface mesh generation for complex configurations",
journal = "International Journal for Numerical Methods in Fluids",
volume = "45",
number = "4",
pages = "341--364",
month = JUN,
year = "2004",
}
@Article{JXLiu2004,
author = "J. X. Liu and J. S. Wu and D. K. Panda",
title = "High performance {RDMA}-based {MPI} implementation over {I}nfini{B}and",
journal = "International Journal of Parallel Programming",
volume = "32",
number = "3",
pages = "167--198",
month = MAY,
year = "2004",
}
@Article{ISaso2004,
author = "I. Sason and R. Urbanke",
title = "Complexity versus performance of capacity-achieving irregular repeat-accumulate codes on the binary erasure channel",
journal = "IEEE Transactions on Information Theory",
volume = "50",
number = "6",
pages = "1247--1256",
month = JUN,
year = "2004",
}
@Article{ATezu2004,
author = "A. Tezuka and J. Matsumoto and K. Matsubara",
title = "Development of common software platform on parallel computations for discretized numerical schemes and its application to finite element fluid dynamics",
journal = "International Journal of Computational Fluid Dynamics",
volume = "18",
number = "4",
pages = "347--354",
month = MAY,
year = "2004",
}
@Article{DJKer2004,
author = "D. J. Kerbyson and A. Hoisie and S. Pakin and F. Petrini and H. J. Wasserman",
title = "A performance evaluation of an alpha {EV}7 processing node",
journal = "International Journal of High Performance Computing Applications",
volume = "18",
number = "2",
pages = "199--209",
month = SUM,
year = "2004",
}
@Article{SSrin2004,
author = "S. Srinivasan and R. S. Miller and E. Marotta",
title = "Parallel computation of the {B}oltzmann transport equation for microscale heat transfer in multilayered thin films",
journal = "Numerical Heat Transfer Part B-Fundamentals",
volume = "46",
number = "1",
pages = "31--58",
month = JUL,
year = "2004",
}
@Article{YYama2004,
author = "Y. Yamada and S. Maeda and T. Tsuchiya and N. Endoh",
title = "Analysis of sound field of aerial ultrasonic sensor by three-dimensional finite-difference time-domain method using parallel computing",
journal = "Japanese Journal of Applied Physics Part 1-Regular Papers Short Notes \& Review Papers",
volume = "43",
number = "5B",
pages = "2869--2870",
month = MAY,
year = "2004",
}

@Article{GAlfo2004,
author = "G. Alfonsi and L. Muttoni",
title = "Performance evaluation of a {W}indows {NT} based {PC} cluster for high performance computing",
journal = "Journal of Systems Architecture",
volume = "50",
number = "6",
pages = "345--359",
month = JUN,
year = "2004",
}

@Article{NEdmu2004,
author = "N. Edmundsson and E. Elmroth and B. Kagstrom and M. Martensson and M. Nylen and Sandgren",
title = "Design and evaluation of a {TOP}100 linux super cluster system",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "8",
pages = "735--750",
month = JUL,
year = "2004",
}
@Article{JAgra2004,
author = "J. Agrawal and T. V. Mathew",
title = "Transit route network design using parallel genetic algorithm",
journal = "Journal of Computing in Civil Engineering",
volume = "18",
number = "3",
pages = "248--256",
month = JUL,
year = "2004",
}

@Article{FChan2004,
author = "F. Chan and J. N. Cao and A. T. S. Chan and M. Y. Guo",
title = "Programming support for {MPMD} parallel computing in {C}luster{GOP}",
journal = "IEICE Transactions on Information and Systems",
volume = "E87D",
number = "7",
pages = "1693--1702",
month = JUL,
year = "2004",
}

@Article{SWBai2004,
author = "S. W. Bai and C. S. Yang and T. C. Huang",
title = "Packing/unpacking using {MPI} user-defined datatypes for efficient data redistribution",
journal = "IEICE Transactions on Information and Systems",
volume = "E87D",
number = "7",
pages = "1721--1728",
month = JUL,
year = "2004",
}

@Article{YMLia2004,
author = "Y. M. Li and S. M. Yu",
title = "A two-dimensional quantum transport simulation of nanoscale double-gate {MOSFET}s using parallel adaptive technique",
journal = "IEICE Transactions on Information and Systems",
volume = "E87D",
number = "7",
pages = "1751--1758",
month = JUL,
year = "2004",
}
@Article{HWang2004,
author = "H. Wang and M. Y. Guo and D. M. Wei",
title = "A parallel implementation of multi-domain high-order {N}avier-{S}tokes equations using {MPI}",
journal = "IEICE Transactions on Information and Systems",
volume = "E87D",
number = "7",
pages = "1759--1765",
month = JUL,
year = "2004",
}
@Article{NWooa2004,
author = "N. Woo and H. S. Jung and H. Y. Yeom and T. Park and H. Park",
title = "M{PICH}-{GF}: {T}ransparent checkpointing and rollback-recovery for grid-enabled {MPI} processes",
journal = "IEICE Transactions on Information and Systems",
volume = "E87D",
number = "7",
pages = "1820--1828",
month = JUL,
year = "2004",
}
@Article{GQZha2004,
author = "G. Q. Zhang and W. S. Zhang",
title = "Methods for wave equation prestack depth migration and numerical experiments",
journal = "Science in China Series A-Mathematics",
volume = "47",
number = "",
pages = "suS",
month = APR,
year = "2004",
}

@Article{OKLim2004,
author = "O. K. Lim and K. S. Hong and H. S. Lee and E. H. Choi",
title = "Initial design domain reset method for genetic algorithm with parallel processing",
journal = "Ksme International Journal",
volume = "18",
number = "7",
pages = "1121--1130",
month = JUL,
year = "2004",
}

%
% From Rolf Rabenseifner (in 1999, but sent in HTML instead of BibTeX format)

@InProceedings{raben99:mpi-perf,
author = {Rolf Rabenseifner},
title = {Automatic Profiling of {MPI} Applications with Hardware Performance Counters},
Booktitle = {Recent Advances in Parallel Virtual Machine and Message Passing Interface. 6th European {PVM/MPI} Users' Group Meeting},
pages = {35--42},
year = 1999,
editor = {J. Dongarra et al.},
number = 1697,
series = {LNCS},
pspaper = {http://www.hlrs.de/people/rabenseifner/publ/profiling_pvmmpi99_29.ps.gz},
pdfpaper = {http://www.hlrs.de/people/rabenseifner/publ/profiling_pvmmpi99_29.pdf},
}


@InProceedings{rgns99:mpi-perf,
author = {Rolf Rabenseifner and Peter Gottschling and Wolfgang E. Nagel and Stephan Seidl},
title = {Effective Performance Problem Detection of {MPI} Programs on {MPP} Systems: From the Global View to the Detail},
booktitle = {Proceedings of Parallel Computing 99 (ParCo99), Delft, The Netherlands},
year = 1999,
pspaper = {http://www.hlrs.de/people/rabenseifner/publ/profiling_parco99_4_llncs.ps.gz},
}



@InProceedings{,
author = {Rolf Rabenseifner},
title = {Automatic {MPI} Counter Profiling of All Users: First Results on a {CRAY T3E} 900-512}, },
OPTcrossref = {},
OPTkey = {},
OPTbooktitle = {Proceedings of the Message Passing Interface Developer's and User's Conference (MPIDC'99), Atlanta},
OPTpages = {77--85},
OPTyear = {1999},
OPTeditor = {},
OPTvolume = {},
OPTnumber = {},
OPTseries = {},
OPTaddress = {},
OPTmonth = MAR,
OPTorganization = {},
OPTpublisher = {},
OPTnote = {},
OPTannote = {},
pspaper = {http://www.hlrs.de/people/rabenseifner/publ/profiling_mpidc99_paper.ps.gz},
}




@InProceedings{rab98:mpi-interop,
author = {Rolf Rabenseifner},
title = {{MPI-GLUE}: Interoperable high-performance {MPI} combining different vendor's {MPI} worlds},
booktitle = {Proceedings of Euro-Par '98, Southhampton, UK},
pages = {563--569},
year = 1998,
series = {LNCS},
month = SEP,
publisher = {Springer-Verlag},
pspaper = {http://www.hlrs.de/people/rabenseifner/publ/mpi_glue_europar98.ps.gz},
}





@TechReport{rab98:mpi-iterop-long,
author = {Rolf Rabenseifner},
title = {{MPI-GLUE}: Interoperable high-performance {MPI} combining different vendor's {MPI} worlds},
institution = {Computing Center University of Stuttgart},
year = 1998,
pspaper = {http://www.hlrs.de/people/rabenseifner/publ/mpi_glue_tr_apr98.ps.gz},
}

% End of 1999 papers from Rabenseifner

@Article{BSchm2004,
author = "B. Schmidt and L. Feng and A. Laud and Y. Santoso",
title = "Development of distributed bioinformatics applications with {GMP}",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "9",
pages = "945--959",
month = AUG,
year = "2004",
}
@Article{NJRiz2004,
author = "N. J. Rizk",
title = "Parallelization of {IBD} computation for determining genetic disease maps",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "9",
pages = "933--943",
month = AUG,
year = "2004",
}

@Article{KHyou2004,
author = "K. Hyoudou and R. Ozaki and Y. Nakayama",
title = "A {PC} cluster system employing {IEEE} 1394",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "10",
pages = "989--1003",
month = AUG,
year = "2004",
}

@Article{GRLue2004,
author = "G. R. Luecke and S. Spanoyannis and M. Kraeva",
title = "The performance and scalability of {SHMEM} and {MPI}-2 one-sided routines on a {SGI} {O}rigin 2000 and a {C}ray {T}3{E}-600",
journal = "Concurrency and Computation-Practice \& Experience",
volume = "16",
number = "10",
pages = "1037--1060",
month = AUG,
year = "2004",
}
@Article{FItoa2004,
author = "F. Ito and N. Amemiya",
title = "Application of parallelized {SOR} method to electromagnetic field analysis ofsuperconductors",
journal = "IEEE Transactions on Applied Superconductivity",
volume = "14",
number = "2",
pages = "1874--1877",
month = JUN,
year = "2004",
}

@Article{JSSim2004,
author = "J. S. Sims and N. Martys",
title = "Simulation of sheared suspensions with a parallel implementation of {QDPD}",
journal = "Journal of Research of the National Institute of Standards and Technology",
volume = "109",
number = "2",
pages = "267--277",
month = "MAR-APR",
year = "2004",
}
@Article{JKKoo2004,
author = "J. K. Koontz and S. C. Dey and S. Chatterjee and S. K. Dey",
title = "M{PI}-implementation of {PFI}-code for numerical modeling of the anatomy of breast cancer",
journal = "International Journal of Computer Mathematics",
volume = "81",
number = "8",
pages = "991--999",
month = AUG,
year = "2004",
}
@Article{YCotr2004,
author = "Y. Cotronis",
title = "Composition of message passing interface applications over {MPICH}-{G}2",
journal = "International Journal of High Performance Computing Applications",
volume = "18",
number = "3",
pages = "327--339",
month = FAL,
year = "2004",
}
@Article{WGrop2004,
author = "W. Gropp and E. Lusk",
title = "Fault tolerance in {M}essage {P}assing {I}nterface programs",
journal = "International Journal of High Performance Computing Applications",
volume = "18",
number = "3",
pages = "363--372",
month = FAL,
year = "2004",
}
@Article{OSiev2004,
author = "O. Sievert and H. Casanova",
title = "A simple {MPI} process swapping architecture for iterative applications",
journal = "International Journal of High Performance Computing Applications",
volume = "18",
number = "3",
pages = "341--352",
month = FAL,
year = "2004",
}

@Article{GEFag2004,
author = "G. E. Fagg and J. J. Dongarra",
title = "Building and using a fault-tolerant {MPI} implementation",
journal = "International Journal of High Performance Computing Applications",
volume = "18",
number = "3",
pages = "353--361",
month = FAL,
year = "2004",
}

@Article{KJere2004,
author = "K. Jeremy and S. Ahalt",
title = "Matlab{MPI}",
journal = "Journal of Parallel and Distributed Computing",
volume = "64",
number = "8",
pages = "997--1005",
month = AUG,
year = "2004",
}
@Article{SLLie2004,
author = "S. L. Liebling",
title = "The nonlinear sigma model with distributed adaptive mesh refinement",
journal = "Classical and Quantum Gravity",
volume = "21",
number = "16",
pages = "3995--4003",
month = AUG,
year = "2004",
}
@Article{TNaga2004,
author = "T. Nagata",
title = "Variable-gain constraint stabilization for general multibody systems with applications",
journal = "Journal of Vibration and Control",
volume = "10",
number = "9",
pages = "1335--1357",
month = SEP,
year = "2004",
}
@Article{HIwas2004,
author = "H. Iwasaki and Z. J. Hu",
title = "A new parallel skeleton for general accumulative computations",
journal = "International Journal of Parallel Programming",
volume = "32",
number = "5",
pages = "389--414",
month = OCT,
year = "2004",
}
@Article{HTLiu2004,
author = "H. T. Liu and B. H. Li and D. S. Qi",
title = "Novel parallel acceleration technique for shooting-and-bouncing ray launching algorithm",
journal = "Ieice Transactions on Electronics",
volume = "E87C",
number = "9",
pages = "1463--1466",
month = SEP,
year = "2004",
}

@Article{NTyag2004,
author = "N. Tyagi and A. Bose and I. J. Chetty",
title = "Implementation of the {DPM} {M}onte {C}arlo code on a parallel architecture for treatment planning applications",
journal = "Medical Physics",
volume = "31",
number = "9",
pages = "2721--2725",
month = SEP,
year = "2004",
}

@Article{TTamu2004,
author = "T. Tamura and G. H. Lu and R. Yamamoto and M. Kohyama and S. Tanaka and Y. Tateizumi",
title = "M{PI} parallelization of the first-principles pseudopotential method program with respect to each band",
journal = "Modelling and Simulation in Materials Science and Engineering",
volume = "12",
number = "5",
pages = "945--957",
month = SEP,
year = "2004",
}

@Article{WSiri2004,
author = "W. Siripunvaraporn and M. Uyeshima and G. Egbert",
title = "Three-dimensional inversion for {N}etwork-{M}agnetotelluric data",
journal = "Earth Planets and Space",
volume = "56",
number = "9",
pages = "893--902",
month = "",
year = "2004",
}

@Article{ZQChe2004,
author = "Z. Q. Chen and A. Delis and H. L. Bertoni",
title = "Radio-wave propagation prediction using ray-tracing techniques on a networkof workstations ({NOW})",
journal = "Journal of Parallel and Distributed Computing",
volume = "64",
number = "10",
pages = "1127--1156",
month = OCT,
year = "2004",
}

@Article{FDeis2004,
author = "F. Deister and U. Tremel and O. Hassan and N. P. Weatherill",
title = "Fully automatic and fast mesh size specification for unstructured mesh generation",
journal = "Engineering with Computers",
volume = "20",
number = "3",
pages = "237--248",
month = "",
year = "2004",
}
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