Here is a list of subsystems that people are working on.
| Claimed Subsystems |
| MAJOR SUBAREA | Subsystem | Claimed by | Status (0,1,2,3 or 4) | Expertise | Forum posting | #of Genomes | #of Variants |
| Adhesion |
| | Fimbriae (Pili) |
| | Mannose-sensitive hemagglutinin type 4 pilus | RobE | 3 | | TBA | 6 | 2 |
| | Afimbrial adhesins |
| Motility |
| | Chemotaxis |
| | Flagella |
| Invasion | Listeria surface proteins: Internalin-like proteins | SvetaG | 2 | A | | 25 | 4 |
| | Invasins |
| Growth in Macrophages |
| | superoxide dismutases |
| | Macrophage induced proteins |
| DNA features |
| | Plasmids |
| | Prophage |
| | Virulence Islands | Listeria Pathogenicity Island LIPI-1 | SvetaG | 2 | A | 3 | 2 |
| | | Listeria Pathogenicity Island LIPI-1 extended | SvetaG | 2 | A | 44 | 3 |
| | Transposons/insertion elements |
| PROTEIN TOXINS |
| | Cytolethal distending toxin of Campylobacter jejuni | OlgaZ | 4 | A | 4 | 1 |
| Immune System Interactions |
| | Superantigens |
| | Toxins |
| | Matrix binding proteins |
| Specific Enzymes |
| | Staphylococcal enterotoxin (e.g ![[WWW]](/SEEDWiki/img/moin-www.gif) PMID:12704169) |
| Cell Wall of Prokaryotes -OlgaZ |
|
| | N-linked Glycosylation in Bacteria | OlgaZ | 1 | A | Includes bacillosamine component |
| | Capsule polysaccharide | OlgaZ | 1 | A | Critical virulence factor, K1 antigen in pathogenic E.coli. A Starting point is "CMP-N-acetylneuraminate Biosynthesis" in core subsystems |
| | Listeria surface proteins: LPXTG motif | SvetaG | 2 | A | | 3 | 3 |
| Resistance to Antibiotics |
|
| | Beta-lactam | MikeK | 1 | B |
|
| | Glycopeptides |
|
| | Aminoglycosides |
|
| | Tetracyclines |
|
| | Macrolides |
|
| | Lincosamides |
|
| | Oxazolidinones |
|
| | Fluoroquinolones | MattC | 1 | B | fourum posting | 23 | 1 |
| | Rifampin |
|
| | Trimethoprim |
|
| | Mupirocin |
|
| Nutrients Acquisition in Host |
|
| | Iron Acquisition Mechanisms |
| | Oligopeptide ABC transporters | SvetaG | 3 | B | | 94 | 2 |
| SIDEROPHORES |
| | see under core subsystems in Vitamins & Cofactors | AndreiO |
